| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3501 |
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| Symbol | |
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| ID | 4075180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 538916 |
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| End bp | 539521 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005016 |
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| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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| Protein accession | YP_611735 |
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| Protein GI | 99078477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.621489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.353099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA TAGAATCCAT TGAAGACCTA GAGGCGCTTT ACGGGACACC GGGAGCGCCT
TCTTTACGCA AGGTGGCGCG GCAAATGACG CCGCTTTATC GCAAGTGGAT CATGGCGTCT
CGGCTGTGCA TGCTGGCCAC GGTCGGCCCC GAAGGCACCG ACGACAGCCC GCGTGGCGAT
GATGGCCCGG TGGTGCTGGA ACTCGATCCG GGCACGCTGG CGCTGCCCGA TTGGCGTGGC
AACAACCGGA TCGACTCCTT GCGCAATATC GTGCGCGACG GGCGGGTATC GCTGATGTTT
CTGGTGCCCG GCTTAAACAA TGTGGTGCGG GTGAATGGCT CCGCGATAGT GACTGCCGAC
CCTGATCTGC TGCAACGCTT TGATAAGGCA GGTAAACTGC CGCGTACGGT CATCGTGATC
AAGATCAACG AGATCTACAG TCAATGCGCG CGCGCCCTGA TGCGCGCCCG TACCTGGACT
TCGGGTGACG AGAGCGAGGG CCTGCCGTCG ATGGGCGACA TCCTTGCCGA GCAGACCGCA
GGCGAAGAAG GCGGTCGCTC CTACGATGAG GCATGGGCTC CCCGTGCCGC CAAAACCATG
TGGTAG
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| Protein sequence | MDAIESIEDL EALYGTPGAP SLRKVARQMT PLYRKWIMAS RLCMLATVGP EGTDDSPRGD
DGPVVLELDP GTLALPDWRG NNRIDSLRNI VRDGRVSLMF LVPGLNNVVR VNGSAIVTAD
PDLLQRFDKA GKLPRTVIVI KINEIYSQCA RALMRARTWT SGDESEGLPS MGDILAEQTA
GEEGGRSYDE AWAPRAAKTM W
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