| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3496 |
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| Symbol | |
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| ID | 4075175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 532652 |
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| End bp | 535303 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638005011 |
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| Product | hypothetical protein |
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| Protein accession | YP_611730 |
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| Protein GI | 99078472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02302] conserved hypothetical protein TIGR02302 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.735765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC AGAAAACCCC CGACGGACCC GACCACCACC CGGTTGAAGC AGCGCTGAGG
CAGCTGGCGC CCCTGCGGCG TGCGCTGTTG CTGACGCGCG CGGGCATGGT GGCTGAACGT
CTCTGGCGCA GTTTCTGGCC TTTGGCGACG GTGCTGCTTC TGGCCGCCGG TTTGGTGCTT
CTGGGGATTT TCGACTGGGT CGTTCTCGAG GTCGCCTGGG GCGGTGCGGT GCTGGTGGTG
CTGGGCGCGG TCGCTGCTAC CGTCTGGGGC GTTATGCTGT TTCGCTGGCC AAAGCCGCAT
GAGGCCGTGG CCCGCCTTGA CGAAACCCTG CCCGGACGCC CGATTGCAGC GATTCTGGAT
CATCAGGTGT CTGGGGCCGA GGATGCCGCG TCCGTCGCGC TCTGGCAGGC GCATCAGGCC
CGGATGGCAG CCCGCGCCGC CGAGGCCGAA GCGCCGGCCC CCAATCTGCG TATTGCTGAC
CGCGATCCCT ATGCGTTGCG TTATGTGGCG CTTCTGGTGC TGGTCACGGG GCTGTTGTTC
GGCACCGCCT GGCGCGCAGG CAGGGTCGCC GAACTCATGC CCGGCGGTGG CAATGCGGGT
CTGAATGGCC CGACCTGGGA GGGCTGGGTC GAGCCGCCGC GCTACACCGG CCTGCCGACG
CTCTATTTGG GGGATCTTAC CGAAGATACC CTGCGCATAC CGCAAAACAG CCGCGTCACC
CTACGGTTCT ATGGCGATGT GGGCGATCTG ACGCTGGCAG AGACCGTCTC TGGCCGCACC
GGAGAGCTGC CCTCTGCCTC CGCGCCGGAG CAGAATTTCA CCGTGACCGA GGCTGGGGAT
CTCACCATTG ATGGTGCTGG CGGTCGCAGT TGGCGCGTGG AGGTGATCCG CGATGCCCCA
CCGCTTGTCT CTCTCGCAGG AGAGCCGGAT CTGTCGGCGG ATGGCACGCT GACCTTGCCG
TTTAATGCCT CGGACGACTA CGGCGTCGTG GGCGGCACGG TGACGATTTC CCTCGACGGG
GCCGCATTGG ACCGCCGCTA TGGGCTGGCA ACCGCGCCGG ATGCCCGCGA TCCCATCACG
CTGCCTTTGC CGCTCTCTCT GACCGGCGAT CGTCGCCTCT TCAGCGAAGT GCTCGAGGAA
GAATTCTCCG CTCATCCCTG GGCCAACCTG CCGGTGATCT ACAGCCTGCG TGCCGAGGAT
GCGGCGGGCC AACAGAGCGT TGCAGCCACC TTGCACGGCC CTTTGACCGC TCGGCGCTTC
TTTGACCCGA TGGCGGCGGC TTTGGTCGAG CAACGGCGCG ATCTCCTCTG GGCGCGCGCC
AACGGGCCAC GAGTCGCAAA AATCCTGCGC ACCCTCAGCC ACCGCCCCGA AGAGCTCTTC
TCGGACATGG GCAACTACCT GCAATTGCGC ACGATTTTGA AGCGATTGGA GCGGTATAGC
GCACATGGCC TGAGCCCCGT TCACCAGGAC GAGATTGCAA GCGCGCTCTG GGCCCTGGCG
TTGCAGCTGG AGGAGGGCGA TGTCGGCGAT GCGCTGGAAC GGATGCGGCA GGCGCAGGAA
CGGCTGAGCC AGGCCATGCG CGACGGCGCC AGTGATGAGG AAATCGCCCG CCTGATGCAG
GAGTTGCGAG AGGCCACCGA CGACTACATG CGCCAGCTGT CGCGACAGGC GCAGCAGCAG
GATGGAGACC AGGAGGGCGG CGAGAGCAGC GACAATGCGA TCCAGCTCAG CCAGCAGGAC
TTGCAGGCCA TGATGGACCG CATCCAGGAG CTGATGGAAC AGGGCCGCAT GGCCGAAGCC
GAACAGGCCC TTCGGGAGTT CCAGCAGATG ATGGAAAACA TGCAGGTCAC ACAGGGTCAG
CCCGGTCAGG GCGACAGCCC CGGCCAGCAG GCCATGGACG GTTTGGCGGA TACCTTGCGC
GAACAGCAAG GCCTGTCGGA TCAGGCCTTC CGAGACCTGC AAGAACAGTT CAACCCCAAC
GCCCAGCGGG GCGAAAGCCA GGGCAATGAG GGCCGGGACG GCGGCCTTGG CCGTGGACAG
AGCCATCAGG GCGGCGGCGC AGGCGGTCAG GACGACGGCC CCCAGGGCGA AGGCGGTCAA
AACGAAGGCC GAGAGGCCGA GGGCGGCCAA TCTCCAAGCG GGGGACAGGG CAACGGCGCG
GGCGATCTTG CGCAACGTCA GCAGGCCCTG CGTGACGAGC TGCAACGCCA GCGCGATGGC
CTGCCTCTTG GCGGACCCGA GGGCGAGGCT GCACGGGACT CGCTCGATCA GGCCGGGCGC
GCCATGGAAG GTGCCGAAGA GGCGCTGCGC GAGGGCGATT ACGCCGAAGC CATTGACCGC
CAGTCCGAGG CCATGGAAGC CCTGCGCGAC GGTATGCGCG CCTTGGGCGA GGCCATGGCA
GAGCAGCAAC AGCAAGGCCA GCAACCGGGC GGCCAGCAAG GACAGAGCAC CCGTCAGGGC
AATGCGCTCG ACCCGCTGGG CCGGGACCGG GGCGGGCAGG GCAGCGACTT CTTTAGCCGT
GACAGCATTG GCGAGGGGCA GGCCTATCGC CGGGCTTGGG ATCTTCTGGA AGAAATCCGA
CGCCGCGCTG GAGAGCGTGA GCGCAGCGAA AGCGAGCGCA ACTACCTGCA ACGTCTGCTG
GATCGCTTCT GA
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| Protein sequence | MSEQKTPDGP DHHPVEAALR QLAPLRRALL LTRAGMVAER LWRSFWPLAT VLLLAAGLVL
LGIFDWVVLE VAWGGAVLVV LGAVAATVWG VMLFRWPKPH EAVARLDETL PGRPIAAILD
HQVSGAEDAA SVALWQAHQA RMAARAAEAE APAPNLRIAD RDPYALRYVA LLVLVTGLLF
GTAWRAGRVA ELMPGGGNAG LNGPTWEGWV EPPRYTGLPT LYLGDLTEDT LRIPQNSRVT
LRFYGDVGDL TLAETVSGRT GELPSASAPE QNFTVTEAGD LTIDGAGGRS WRVEVIRDAP
PLVSLAGEPD LSADGTLTLP FNASDDYGVV GGTVTISLDG AALDRRYGLA TAPDARDPIT
LPLPLSLTGD RRLFSEVLEE EFSAHPWANL PVIYSLRAED AAGQQSVAAT LHGPLTARRF
FDPMAAALVE QRRDLLWARA NGPRVAKILR TLSHRPEELF SDMGNYLQLR TILKRLERYS
AHGLSPVHQD EIASALWALA LQLEEGDVGD ALERMRQAQE RLSQAMRDGA SDEEIARLMQ
ELREATDDYM RQLSRQAQQQ DGDQEGGESS DNAIQLSQQD LQAMMDRIQE LMEQGRMAEA
EQALREFQQM MENMQVTQGQ PGQGDSPGQQ AMDGLADTLR EQQGLSDQAF RDLQEQFNPN
AQRGESQGNE GRDGGLGRGQ SHQGGGAGGQ DDGPQGEGGQ NEGREAEGGQ SPSGGQGNGA
GDLAQRQQAL RDELQRQRDG LPLGGPEGEA ARDSLDQAGR AMEGAEEALR EGDYAEAIDR
QSEAMEALRD GMRALGEAMA EQQQQGQQPG GQQGQSTRQG NALDPLGRDR GGQGSDFFSR
DSIGEGQAYR RAWDLLEEIR RRAGERERSE SERNYLQRLL DRF
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