Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3489 |
Symbol | |
ID | 4075129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 522127 |
End bp | 523041 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638005004 |
Product | 2-keto-3-deoxygalactonate kinase |
Protein accession | YP_611723 |
Protein GI | 99078465 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.770772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC CTGAGCAGAC CTCGGTTGAC TGGGTGGCGG CGGATTGGGG CACCTCCCAT CTGCGCCTCT GGCCCATGGG CACTGATGGC GTGCCGCTAG AGCGGATCGA TTCTGATCAG GGCATGTCGC GGCTGACTGC GGATGACTAC GAGCAGGTGC TGCTGGATCT TCTTGCGCCC TACCTGGCTC CTGAAACCGC GCTGGATGTG ATCTGTTGTG GCATGGTTGG CTCGCGTCAG GGCTGGCGCG AGGCGCCTTA CGCCGCAAGC CCCTGCGCGC CGCCGTCCTT TGATACCGCG ACGGCGGTGC AAACCGACGA TCCCCGGCTG CGCGTGCATG TGCTTTCGGG GGTGAAACAG CTTGCACCCG CGGATGTGAT GCGCGGAGAA GAGACGCAGA TCGCCGGCGT GCTGGTGGCC GACCCCGGCT TTGACGGGGT GGTCTGTCTA CCCGGCACCC ACACCAAATG GGTTTCGCTC AAGGACGGGG CGATCACCGG CTTTTCCACC TTTCTCTCGG GCGAATTGTT TCAGCTCATC AGCGCGCAAT CCGTCCTGCG CCACACGCTT GCGGGCGCGG GCTGGGATCA GGCGGCATTC GAAACTGGCT GCCAACAGGG GGCCGCACGC CCCGAGTTCC TGGCAAATGC GCTCTTCGGG CTGCGCGCCG GTGCCTTGCT CGAAGGGCTT GATCCGGTTG CGGCGCGCGC GCGTGCATCT GGCTATCTCC TCGGTATGGA GGTCGAAGCC ATGCGCGAGG ACTGGCAAGG CCGCCCGGTG GCCATGGTGG GCGAGAACGA GATCGCCCAA GCCTATGCCA CCGCCCTCAG ACTGCAGGGC GCGTCGGTGG AAATCCTCGA CGCCCAGGAC ATCACACTGG CTGGCCTCTG CGCCGCCCGT GCGCAAATGA AGTGA
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Protein sequence | MTAPEQTSVD WVAADWGTSH LRLWPMGTDG VPLERIDSDQ GMSRLTADDY EQVLLDLLAP YLAPETALDV ICCGMVGSRQ GWREAPYAAS PCAPPSFDTA TAVQTDDPRL RVHVLSGVKQ LAPADVMRGE ETQIAGVLVA DPGFDGVVCL PGTHTKWVSL KDGAITGFST FLSGELFQLI SAQSVLRHTL AGAGWDQAAF ETGCQQGAAR PEFLANALFG LRAGALLEGL DPVAARARAS GYLLGMEVEA MREDWQGRPV AMVGENEIAQ AYATALRLQG ASVEILDAQD ITLAGLCAAR AQMK
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