Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3482 |
Symbol | |
ID | 4075122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 513488 |
End bp | 514279 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004997 |
Product | IclR family transcriptional regulator |
Protein accession | YP_611716 |
Protein GI | 99078458 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGG CAAATGCGCC GCAGCGCAGC AATGACGGAA CCGTCGGAAA AGCCTTGGAA GTTTTGGATC AGGTCGCGGA ATACGGACGG CCTGTGCGCT TTGGCGAATT GCTCGCGGCG TCGGTGCATC CAAAGGCCAC GCTCTATCGG CTGGTCCAGA CACTGACGAA TCAGGGCATG CTCAGTTTCG ACGAGGCACA GCAGACCTAC GCCCCCGGAT TGCGGTTGGT CCGGCTCGCG CATGCGGCCT GGCGACAGAG CTCGCTTGCG CCGGTGGCCC GTCCGCATCT GGATGCGCTG TCTGCAGAGG TTGGTGAGAC CATCCACCTG GCGCAGCTCG ATCAGGGGCA GGTGCTCTAT GTGGACAAGC GCAACGCCCG CACCCCGATC GAGATGTTCA GTCAGGCTGG CAAGATCGGC CCCGGCTATT GCACCGGGGT CGGCAAAGCG ATGATCGCGC ATCTGGACGA GAGCGCCCGC GAGGACGCGA TCCGGCGGCA GGCGTTTTTC CAGCACACCG CGCATACTCT GGCCAATGAA GCCGGTTTTC GCGCAGAGCT TGACGACATT CGCGCGCAGG GCATCGCCTT TGACCGCGAA GAACACGAAC CCGGTATCAT CTGCATCGCC GCCCCGATCC TGTCATCAAA GGATCGTGTC ATGGGGGCCT TGTCGATCAC CTCATCAACA GAGCGGCAAT CTCTGGAGGG TCTCACCTCT CTGAAACCGC TGCTTTTGAA GACTGCAAAT GAGATCGCTG AGGCTGCCGA AAGCTGGCAG TTCCCCACCT GA
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Protein sequence | MATANAPQRS NDGTVGKALE VLDQVAEYGR PVRFGELLAA SVHPKATLYR LVQTLTNQGM LSFDEAQQTY APGLRLVRLA HAAWRQSSLA PVARPHLDAL SAEVGETIHL AQLDQGQVLY VDKRNARTPI EMFSQAGKIG PGYCTGVGKA MIAHLDESAR EDAIRRQAFF QHTAHTLANE AGFRAELDDI RAQGIAFDRE EHEPGIICIA APILSSKDRV MGALSITSST ERQSLEGLTS LKPLLLKTAN EIAEAAESWQ FPT
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