| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3478 |
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| Symbol | |
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| ID | 4075112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 502467 |
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| End bp | 503726 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004987 |
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| Product | hypothetical protein |
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| Protein accession | YP_611712 |
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| Protein GI | 99078454 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3748] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.300585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGC TTGTCATCAT GTGGGACTGG CTGGGGTTTG CCGTCCGCTG GCTACATGTC
ATCACCGCGA TCGCCTGGAT CGGGTCGTCC TTTTATTTCG TGGCGCTGGA TCTGGGGCTG
CGCAAGGTGC CGCATCTTCC GGTGGGCGCG CATGGTGAAG AGTGGCAGGT GCACGGCGGT
GGCTTTTACC ACATCCAGAA ATATCTGGTC GCCCCGGCCA ATATGCCCGA CCACCTGATC
TGGTTCAAAT GGGAGAGCTA CGCCACCTGG CTCTCGGGGG CTGCGCTCCT GATGATCGTC
TACTGGGCGG GCGGCGAGCT CTATCTCATT GACGCAAACA AGGCCGACCT GGCGCTGTGG
CAGGGGATCC TGATTTCCGG CGCATCGCTG AGCGTGGGCT GGCTGGTCTA TGACTTTTTG
TGCAAATCCC CGCTTGGCGA AAAGCCGACC ATGCTGATGG TGCTGTTGTT CGTGCTGCTG
GTAGCCATGG GTTATGGTTA CAACCAGATC TTTACCGGCC GGGCGGTGAT GCTGCATCTG
GGGGCCTTCA CGGCGACCAT CATGACGGCG AATGTGTTCT TTATCATCAT GCCGAACCAG
CGCATCGTGG TAAAAGACCT GCAAGAAGGG CGCACGCCGG ATGCAAAATA CGGCAAGATC
GCCAAGCTGC GCTCGACGCA CAACAACTAC CTGACCTTGC CGGTGATCTT CCTGATGCTC
TCCAACCACT ATCCGCTGGC CTTTGCCACC GAGTACAACT GGCTGATTGC GGCGCTTGTG
TTCCTGATGG GGGTGACGAT CCGTCACTAC TTCAACACGC GGCACGCGGG CGCGGGCAAT
CCGACCTGGA CCTGGCCCGT GACGATCCTG CTGTTCATTG CCATCATGGC ATTGAGCCAA
GCGCCGCTGG TGCAGGACAC CTATGAGGAG TCCGAGGCGC GTACACTGAC CCAAACCGAG
CTGGCTTTTG CTGGCTCGGA GCATTTCGAG GACGTGATGA ATGTGGTGCC GGGACGTTGC
GCCATGTGCC ACGCGCGCGA GCCTTATTAC GACGGCATCC GCCGCGCGCC CAAGAATGTG
TTGCTCGAAA CACCGGCAGA TGTCGCCAAA TACGCCCGGC AGATCTATCT TCAGGCCGGG
GCGACCCATG CAATGCCGCC TGCAAATGTG ACCTATATGG AAGAGGACGA GCGCGCGCTC
ATCCGTCAAT GGTATGCAGA TGGCGCGGCA GAGCTGCCCT TCTATCTGGC GGGCAACTGA
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| Protein sequence | MQELVIMWDW LGFAVRWLHV ITAIAWIGSS FYFVALDLGL RKVPHLPVGA HGEEWQVHGG
GFYHIQKYLV APANMPDHLI WFKWESYATW LSGAALLMIV YWAGGELYLI DANKADLALW
QGILISGASL SVGWLVYDFL CKSPLGEKPT MLMVLLFVLL VAMGYGYNQI FTGRAVMLHL
GAFTATIMTA NVFFIIMPNQ RIVVKDLQEG RTPDAKYGKI AKLRSTHNNY LTLPVIFLML
SNHYPLAFAT EYNWLIAALV FLMGVTIRHY FNTRHAGAGN PTWTWPVTIL LFIAIMALSQ
APLVQDTYEE SEARTLTQTE LAFAGSEHFE DVMNVVPGRC AMCHAREPYY DGIRRAPKNV
LLETPADVAK YARQIYLQAG ATHAMPPANV TYMEEDERAL IRQWYADGAA ELPFYLAGN
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