| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3476 |
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| Symbol | |
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| ID | 4075110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 501014 |
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| End bp | 501370 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004985 |
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| Product | transthyretin |
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| Protein accession | YP_611710 |
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| Protein GI | 99078452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.367567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGAT ATCTGACCAC ACATGTTCTG GACACCGCGC GGGGCTGTCC CGCAGAGGGG
ATCGAGATCG CCCTTTATAA GGTGAGCGCC GGCGCGCGCG AGAAAGTTGC GCAGACCGTG
ACCAATAGCG ATGGGCGCAC CGATAGCCCG ATCCTGCCTG CAGAGCGTTT TGCGACCGGC
AGTTATGAGC TGGTGTTTTT CTGTGGCGAC TACCTGCGTG CCACCGGCCA GGCGGGGGAG
GACCCGCTGT TTCTCGATGA AGTGCCGATC CGGTTCGGGA TGAGCGAGGC GGAGAGCCAT
TATCATGTGC CGCTACTGCT CTCGCCCTAT GGCTACTCCA CCTATCGGGG CAGCTGA
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| Protein sequence | MSGYLTTHVL DTARGCPAEG IEIALYKVSA GAREKVAQTV TNSDGRTDSP ILPAERFATG
SYELVFFCGD YLRATGQAGE DPLFLDEVPI RFGMSEAESH YHVPLLLSPY GYSTYRGS
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