Gene TM1040_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3474 
Symbol 
ID4075108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp498896 
End bp499402 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID638004983 
Productureidoglycolate hydrolase 
Protein accessionYP_611708 
Protein GI99078450 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.177168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CCCTCACGGC CCGCCCCCTC ACGGCAGAGG CGTTTGCCCC CTATGGCGAT 
CTCCTGATGC CAAAGCCAGA GCCCGACAAG ATCATCAATC AGGGCAAATG CGGCCGCCAC
CATGATCTCG CGCAGCTCGA TTTTGCGGAT GGTCGCGCAG GCATCAGCCT CTTTGTCTCC
GAGGCGCGGC ATCTCCCTTA CGAGGTAGAG CTGGTCGAAC GCCACCCCGA GGGCAGCCAG
GCCTTTGTGC CGCTTGATGG CGTGCCGATG ATCGTGATCG TGGCCCCCGA CGCGGATGGC
AGCCCCGGCC AGCCCGAAGC CTTCCTGAGC GCACCGGGCC AGTCGATCAA CCTGCATCGC
GGCACCTGGC ATGGCGTGCT CGCACCCTTT CAGCAGCCCG GTCAGTACAT CGTCATCGAC
CGCATCGGCG ATGGCGCCAA CCTCGAAGAA CACTGGTTCC AAGAGCCTTG GATCGTCACC
GAAATTTCAG CACCGGCGGA GGGATAG
 
Protein sequence
MSRTLTARPL TAEAFAPYGD LLMPKPEPDK IINQGKCGRH HDLAQLDFAD GRAGISLFVS 
EARHLPYEVE LVERHPEGSQ AFVPLDGVPM IVIVAPDADG SPGQPEAFLS APGQSINLHR
GTWHGVLAPF QQPGQYIVID RIGDGANLEE HWFQEPWIVT EISAPAEG