| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3468 |
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| Symbol | |
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| ID | 4075102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 492552 |
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| End bp | 494063 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004977 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_611702 |
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| Protein GI | 99078444 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TCGCCGTCAA CCTCGACAAA CTCGCAGGTT TTCTCGAAGA ATACCGAAAA
TCCGGCATCA CCAACCTCAT TGGCGGCGAG GCCCGCCCCG CCGCCTCCGG CCAGACGTTT
GAAACGACCT CGCCGGTGGA TGAGAGCGTG ATCTGCTCGG TGGCCCGCGG CGGGTCCGAG
GACATAGATG CAGCCGCACA GGCCGCCAAA GCCGCCTTCC CCGCATGGCG CGACCTGCCC
GCGACCGAAC GCAAGGCGAT CCTGCACCGC ATCGCAGATG GGATTGTGGA ACGGGCCGAG
GAAATCGCGC TCTGCGAGTG CTGGGACACC GGTCAGGCGC TGCGCTTCAT GTCCAAAGCG
GCCCTGCGCG GAGCAGAGAA TTTTCGCTTC TTTGCCGACC GTGCGCCTTC GGCCCGCGAT
GGTCAGATGC TGCCCTCGCC CACCTTGATG AATGTCACCA CCCGTGTGCC GATCGGCCCT
GTGGGTGTCA TCACACCCTG GAATACGCCC TTCATGCTCT CCACATGGAA GATCGCGCCT
GCCTTGGCCG CGGGCTGCAC CGTCGTCCAT AAACCGGCAG AGTTCTCGCC CCTGACGGCC
CGTATTCTGG CGGAGATCGC CCATGATGCG GGCCTGCCCC CCGGCGTCTG GAACCTCGTC
AACGGCCTCG GCGAAGAGGC CGGCAAGGCG CTCACCGAAC ATCCCGACAT CAAGGCCATC
GCCTTTGTCG GTGAGAGCAA AACCGGCTCG ATGATCATGG CCCAAGGCGC GCCGACCCTG
AAACGTGTGC ATTTTGAACT CGGCGGCAAG AACCCGGTGG TGGTCTTTGA CGATGCCGAT
CTCGACCGGG CCTTGGACGC GGCGATCTTC ATGATCTACT CGCTGAATGG CGAGCGCTGC
ACCTCTTCCT CGCGCCTGCT CATTCAGGAC AGCATCGCCG AGGCATTCGA GGCCAAACTG
CTCGCGCGTG TAAACAGCAT CAAGGTCGGC CACCCGCTTG ACCCCCAAAC CGAGGTCGGC
CCGCTCATTC ACAAGACCCA CTTCGACAAG GTGACCTCCT ATTTCGACAT CGCGCGGCAC
GATGGCGCCA CCGTCGCCGC AGGTGGCAGC CGCCACGGCG ACACCGGCTG GTTTGTCAAA
CCCACGCTCT TTACCGGGGC CACCAATCAG ATGACCATCG CCCGCGAGGA AATCTTCGGC
CCGGTCCTCA CCGCCATCCG CTTCACCGAC GAAGACGAGG CGCTGAACAT CGCCAATGAC
ACCCAATATG GCCTCACCGC CTATGTCTGG ACCAACGATG TGACCCGCGC CATGCGCTTC
ACCAACCAGC TTGAGGCCGG GATGATCTGG GTGAACTCGG AAAACGTCCG CCACCTGCCT
ACGCCCTTTG GTGGGGTCAA GGCTTCCGGG ATCGGGCGCG ACGGCGGCGA CTGGAGCTTT
GAGTTCTACA TGGAACAGAA ACACATCGGC TTTGCCACCG GCCACCACAA GATCCCCCGC
CTCGGCGCCT GA
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| Protein sequence | MSDLAVNLDK LAGFLEEYRK SGITNLIGGE ARPAASGQTF ETTSPVDESV ICSVARGGSE
DIDAAAQAAK AAFPAWRDLP ATERKAILHR IADGIVERAE EIALCECWDT GQALRFMSKA
ALRGAENFRF FADRAPSARD GQMLPSPTLM NVTTRVPIGP VGVITPWNTP FMLSTWKIAP
ALAAGCTVVH KPAEFSPLTA RILAEIAHDA GLPPGVWNLV NGLGEEAGKA LTEHPDIKAI
AFVGESKTGS MIMAQGAPTL KRVHFELGGK NPVVVFDDAD LDRALDAAIF MIYSLNGERC
TSSSRLLIQD SIAEAFEAKL LARVNSIKVG HPLDPQTEVG PLIHKTHFDK VTSYFDIARH
DGATVAAGGS RHGDTGWFVK PTLFTGATNQ MTIAREEIFG PVLTAIRFTD EDEALNIAND
TQYGLTAYVW TNDVTRAMRF TNQLEAGMIW VNSENVRHLP TPFGGVKASG IGRDGGDWSF
EFYMEQKHIG FATGHHKIPR LGA
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