Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3453 |
Symbol | |
ID | 4075087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 476650 |
End bp | 476988 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004962 |
Product | hypothetical protein |
Protein accession | YP_611687 |
Protein GI | 99078429 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAAC AAAACACCGG CGCATTCCCG TCATCGCCCG AGCAGGTCGT CTTTCACCGA CGTGAGCTTT CCGTGATCAT GTCGCTCTAT GGCCGAATGG TTGCCGCTGG CGAATGGCGC GACTATGGCT TGTCCCATCT GCGCGAGATG GCGGTGTTTT CTGTCTTTCG CCGCACCGCT GAAAACCCGC TTTACCGGAT CGAAAAACGC CCAAAGCTGC GCAATCGGCA GGGGCAATAC TCCGTGGTGG GCATGGATGG GCAGATCCTC AAGCGCGGCA ATGATCTGAA AACGGTGCTG CGTGTGCTGG AGCGTAAACT GATCCGAGTG GTGGACTGA
|
Protein sequence | MNQQNTGAFP SSPEQVVFHR RELSVIMSLY GRMVAAGEWR DYGLSHLREM AVFSVFRRTA ENPLYRIEKR PKLRNRQGQY SVVGMDGQIL KRGNDLKTVL RVLERKLIRV VD
|
| |