Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3448 |
Symbol | |
ID | 4075082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 472465 |
End bp | 473310 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004957 |
Product | carboxylesterase |
Protein accession | YP_611682 |
Protein GI | 99078424 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.775669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGT CACTGGAAAC CGTGTCCGAA AACCGCGCCT TTGGGGGCGT GCAGGGTGTC TACCGCCACA AAAGCAGCAG CACCAATTGC GAGATGACTT TTGGCCTGTT CCTCCCCGAG GAGGCCAAGG ATGGCCCCGT GCCCGTGTTG TGGTATCTGT CGGGCCTGAC CTGCACACAT GAAAACGCCA TGACAAAGGC CAGCGCGCAG GCCTGGTGTG CCGAGCAGGG GATCGCCATT GTCTTTCCCG ACACCTCGCC GCGCGGCGAA GGCGTTGCCA ATGACGAGGC GTATGATCTG GGACAGGGCG CTGGGTTTTA TGTGAACGCC ACCCAGGACC CCTGGAAGCC GCATTTCCAG ATGTGGGACT ATGTGGCCGA AGAGCTGCCC GCGCTGCTTG GCGCCAATTT CAACCTCGAC ATGTCCCGTC AGGCGATCAC CGGACACTCC ATGGGCGGGC ACGGCGCGCT GACGCTGGCG ATGAACCTGC CGGGTCGGTT CCGGTCCGTT TCCGCCTTTG CGCCGATCTG CAACCCCACC AACAGCGACT GGGGCCGCAA GCAGCTTTTG GCCTATCTGG GCGATGATGA GACCGCATGG GCCAAGCATG ATGCCACGCT GTTGATGCGC GAAGCAGGGT TTGACGGCCC CGTCCTCATC GACACCGGCA CCGCCGACCA GTTCGGGGAT CTCTTGAAAA CCGAAAGCAT GGCCGAAGCG ATTGCCACCC GCCGTCAGGA GGCCACATTG CGAATGCAGA AGGGCTATGA CCATAGCTAC TTCTTTGTCT CCACCTTCAT GGAGGAGCAT GTCTCCTTCC ACGCCGACGC CCTCTATCGG GAGTAA
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Protein sequence | MEPSLETVSE NRAFGGVQGV YRHKSSSTNC EMTFGLFLPE EAKDGPVPVL WYLSGLTCTH ENAMTKASAQ AWCAEQGIAI VFPDTSPRGE GVANDEAYDL GQGAGFYVNA TQDPWKPHFQ MWDYVAEELP ALLGANFNLD MSRQAITGHS MGGHGALTLA MNLPGRFRSV SAFAPICNPT NSDWGRKQLL AYLGDDETAW AKHDATLLMR EAGFDGPVLI DTGTADQFGD LLKTESMAEA IATRRQEATL RMQKGYDHSY FFVSTFMEEH VSFHADALYR E
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