| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3438 |
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| Symbol | panB |
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| ID | 4075612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 463587 |
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| End bp | 464429 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004947 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_611672 |
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| Protein GI | 99078414 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.302745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.811789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAT CATCGCAAAA AACGGCCCTA ACGGCCGAAG ACATCCGGGC CATGAAAGGG
CGGACCCCGA TTGTCAGCCT CACGGCTTAT ACCACACCGA TGGCGCAGCT GATGGATGAA
CATTGCGATT TTGTACTGGT CGGGGACAGC GTCGGCATGG TGTTGCATGG GCTGCCGTCG
ACGCTTGGGG TCACGATGGA GATGATGATC CTGCACGGTG CTGCCGTCGC TCGCGGCCTG
AAGCGCGCGA TGATGGTGAT CGACATGCCC TTCGGAAGCT ACGAACAATC GCCAGCGCAG
GCCTTTGCGA ATGCCGCCCG TCTGATGGCG GAAACCGGTG CGGCGGCTGT CAAACTCGAA
GGCGGCGAAG AGATGGCCGA CACCATCCGC TTTCTCGTGA AACGCGGTAT TCCCGTGATG
GCGCATATCG GGCTCACGCC GCAGTCGATC AACACGCTGG GCGGCTACAA GGTGCAGGGC
CGCGACGACG CTGCCAAACC CCTTATCGCC GATGCCCGCG CGGTTGCTGA GGCCGGGGCC
TTTGCGGTGG TTCTGGAAAA AGTCCCGGCA AGCCTTGCCG ATCAAGTGAC TGAGATCGTC
GACATTCCCA CCATCGGCAT CGGGGCCTCT GCGGGCTGTG ATGGCCAGGT GCTGGTGGTG
GATGACATGC TTGGCTTTTT TGGCGCCTTC AAGCCGAAGT TCGTCAAACG CTACGCCGAG
CTTGGCCCCG CCGCCGAAGA AGCAATCGCA GACTACGCCT CCGAGGTCCG CGCGCGGCGT
TTTCCCAGTG CAGAACACAC CTTTGCGGAC CACGCGCCGC AAAAAGCCCC TCAACAAGAC
TGA
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| Protein sequence | MSASSQKTAL TAEDIRAMKG RTPIVSLTAY TTPMAQLMDE HCDFVLVGDS VGMVLHGLPS
TLGVTMEMMI LHGAAVARGL KRAMMVIDMP FGSYEQSPAQ AFANAARLMA ETGAAAVKLE
GGEEMADTIR FLVKRGIPVM AHIGLTPQSI NTLGGYKVQG RDDAAKPLIA DARAVAEAGA
FAVVLEKVPA SLADQVTEIV DIPTIGIGAS AGCDGQVLVV DDMLGFFGAF KPKFVKRYAE
LGPAAEEAIA DYASEVRARR FPSAEHTFAD HAPQKAPQQD
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