| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3434 |
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| Symbol | |
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| ID | 4075608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 458378 |
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| End bp | 459988 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004943 |
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| Product | ABC transporter related |
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| Protein accession | YP_611668 |
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| Protein GI | 99078410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.560851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC TGGATATTTC CAACCTCTCG CTCTCGATCG GGGCGCTGCC GATCCTGCGG
AATGTGACCC TGTCGATAGC GGCAGGCGAG ATCCTCGCGG TGACGGGCGA GAGCGGATCT
GGCAAATCGA TGACGGCTTT TTCCGTCATG CGCCTGTTGC CGCAGGCTGC CAAGATTGAC
GGCGCGATTT ACCTTGAGGA CGAAAACCTC TGCGCCCTCT CCGAAGACGA GATGTGCCAG
CGGCGCGGGC GTGACATCGG TATGGTGTTT CAAGAGCCCA TGACGGCGCT CAACCCGGTG
ATGACCATCG GGGCGCAGGT GATGGAGACG ATCCTCTTGC ACACCGACAC CGCCGAAGCC
GACGCCAAGG CCGAGGCCGC GCGCGTGTTG ACCCGGGTCG GCCTGCCGCC GGAGCGTTTC
CCGATGGATC GCTACCCGCA CGAGCTCTCT GGCGGACAAC GTCAGCGCGT TGTGATCGCG
ATGGCGATTG CGCTCAGGCC CAAGCTCTTG ATCGCGGATG AACCCACAAC CGCGCTGGAT
GTGACTACAC AGGCGCAGAT CCTTGATCTC TTGCGGGACC TGGTGCGCGA ATACGGGATG
GGGCTGCTCA TTATCACCCA TGACCTTGCT GTTGTGGCCG ATCTTGCCGA TCGGATCGTG
GTGATGCGCA AGGGTGAGGT GGTCGAGCGC GGCCCGACCC TGAGCGTGCT CACCCATCAA
CGCCACCCCT ATACGCGCAT GCTGTTTGAG GCGTCCGCTC ACAAGGTTGC GCTGCCTGCC
GCGCCCGAGG CCCCTGCCCC GCTGCTGGAG GTGCGAGGCG CCGTGCGCGA CTATGCAACG
CCTCGCAAAG GCTGGCTGGG CAAACCAGGC ACGTTTCGCG CCGTCAACGA TGTGAGCTTC
ACGCTTCACA AGGGCGAGCG TCTGGGCCTT GTGGGCGAGT CCGGATGCGG CAAATCCACC
CTGACCCGGG CCATTCTGGG CCTCGAAGGG CTGCAAGGCG GAGAGCTGCT GCTGAACGGT
CAGCCCCTGT CGCAACAGCG CAGCGCCGCC CAGCGGCAAG CGATGCAGGT GGTGTTTCAG
GACCCTTATG GCAGTTTCAA TCCGCGCCAC CGGGTTGAGC GGCTGGTGAC GGAACCGTTT
CATCTATCGC CGGACGCCGC AACCGGCCAA GAGCGGCGCG ACCTGGTGGG ACAGGTGCTG
GAGGACGTGG GGCTCAAGGC TTCGGATGCA AACAAGTATC CGCATCAGTT TTCCGGTGGG
CAACGTCAGC GCATCGCCAT TGCGCGCGCG CTGATTACGC GGCCCGAGCT CATCATCTTT
GACGAGGCGG TCTCGGCGCT CGATGTCTCG GTGCGCGCCC GTATTCTCGA CCTGATTGCC
GAGCTCTGCG AGGCCTATGG GCTCACCTAT CTCTTTATCA GCCACGATCT GAGCGTGGTG
CGCGAGGTCT GCGACCGGGT GCTGGTGATG CAGAAGGGCG AAATCGTCGA AGAAGGCCCC
GTCGACGACG TCTTTACCGC GCCACAGCAC AGCTACACGC AGAAACTTCT GGCGGCGGCG
CCGGTGCTGC CGGACATCAC GCCAACCGAG CCCGTTGAGG CCCCCGCATG A
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| Protein sequence | MSLLDISNLS LSIGALPILR NVTLSIAAGE ILAVTGESGS GKSMTAFSVM RLLPQAAKID
GAIYLEDENL CALSEDEMCQ RRGRDIGMVF QEPMTALNPV MTIGAQVMET ILLHTDTAEA
DAKAEAARVL TRVGLPPERF PMDRYPHELS GGQRQRVVIA MAIALRPKLL IADEPTTALD
VTTQAQILDL LRDLVREYGM GLLIITHDLA VVADLADRIV VMRKGEVVER GPTLSVLTHQ
RHPYTRMLFE ASAHKVALPA APEAPAPLLE VRGAVRDYAT PRKGWLGKPG TFRAVNDVSF
TLHKGERLGL VGESGCGKST LTRAILGLEG LQGGELLLNG QPLSQQRSAA QRQAMQVVFQ
DPYGSFNPRH RVERLVTEPF HLSPDAATGQ ERRDLVGQVL EDVGLKASDA NKYPHQFSGG
QRQRIAIARA LITRPELIIF DEAVSALDVS VRARILDLIA ELCEAYGLTY LFISHDLSVV
REVCDRVLVM QKGEIVEEGP VDDVFTAPQH SYTQKLLAAA PVLPDITPTE PVEAPA
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