| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3432 |
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| Symbol | |
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| ID | 4075606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 456618 |
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| End bp | 457907 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004941 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_611666 |
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| Protein GI | 99078408 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.743424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.533019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATATTG CAACGCGCGT CTACAATCAC AAGTGGAAGA TTGATCCAAT CGTCCGGTCG
CTGATTGATA CGGATTTCTA CAAACTCTTG ATGTGTCAGT CGGTCTTTCG CAACAAACCT
GATACGCAGG TGACCTTCTC GCTGATCAAC CGCTCTGACA AGGTGCCGCT TGCGCGTCTC
ATCGACGAGG GCGAGCTGCG CGAGCAGCTG GATCACATCC GCTCCCTGAG TCTCAGCCGC
GGCGAAAGCA CATGGCTGCG CGGCAACACG TTCTACGGCA AACGCCAGAT GTTTCGGCCC
GACTTCATGG AGTGGTTCGA AAACCTGCGC CTGCCGCCTT ATCACCTTGA ACGCAAGGGT
GATCAATACG AGCTGACCTT TGAAGGGTCC TGGCCCGAGG TCATGCTGTG GGAAATTCCC
GCGCTTGCGG TGCTGATGGA GCTGCGCTCG CGCGCGGTCC TGAATGACAT GGGCCGGTTC
GAGCTGCAGG TGCTCTATGC CCGAGCGATG ACCAAAGTCT GGGAGAAAAT CGAACAATTG
CGCCAGATCG ACGGTCTCGG GATCGCGGAT TTTGGCACCC GGCGCCGCCA TAGCTTTTTG
TGGCAGGACT GGTGCGTGCA GGCGATGATG GAAGGGCTTG GCGGGTCTTT TACCGGCACC
TCCAACTGTC TCATTGCGAT GCGCCGCGAG GTCGAGGCCA TTGGCACCAA CGCGCATGAG
CTGCCGATGG TCTACTCTGC TTTGGCCGAA GATGACGCGG CGCTTGCCCG CGCGCCCTAT
GATGTCCTGT CGGACTGGCA CGAGGAACAC GAGGGCAACC TGCGCATCAT TCTCCCGGAC
ACCTACGGCA CCAAGGGCTT TTTGGAAAAT GCGCCGGACT GGCTGGCGGG ATGGACGGGT
ATTCGGATCG ACAGTGGCGA TCCGGCGGCG GCGGCAGAAA TCGCTATCAA GTGGTGGCAG
GATCGCGGCG AGGATCCCAC TGAAAAACGT GTGATCTTTT CCGATGGGCT GGATGTGGGC
AAGATCGCAG AATTGCACCG GCAGTTTTCG GGTCGGGTCA AAGCCTCCTT CGGCTGGGGT
ACGCTTTTGA CCAATGATTT CCGCGGCCTC GTCCCTGATG ACGGCCTCGC GCCCTTCTCG
GTGGTGTGCA AGGCGGTTTC GGCCAATGGG CGCCCGACGG TCAAGCTCTC GGACAATCCC
GAAAAGGCGA TGGGCCCCAA GGATGAGATC GCGCGGTACA AGCGGGTGTT CGGCGTCGGC
ACGCAAGAGC GTATCGACGT GATTGTCTGA
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| Protein sequence | MDIATRVYNH KWKIDPIVRS LIDTDFYKLL MCQSVFRNKP DTQVTFSLIN RSDKVPLARL
IDEGELREQL DHIRSLSLSR GESTWLRGNT FYGKRQMFRP DFMEWFENLR LPPYHLERKG
DQYELTFEGS WPEVMLWEIP ALAVLMELRS RAVLNDMGRF ELQVLYARAM TKVWEKIEQL
RQIDGLGIAD FGTRRRHSFL WQDWCVQAMM EGLGGSFTGT SNCLIAMRRE VEAIGTNAHE
LPMVYSALAE DDAALARAPY DVLSDWHEEH EGNLRIILPD TYGTKGFLEN APDWLAGWTG
IRIDSGDPAA AAEIAIKWWQ DRGEDPTEKR VIFSDGLDVG KIAELHRQFS GRVKASFGWG
TLLTNDFRGL VPDDGLAPFS VVCKAVSANG RPTVKLSDNP EKAMGPKDEI ARYKRVFGVG
TQERIDVIV
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