| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3429 |
|---|
| Symbol | |
|---|
| ID | 4075603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 452503 |
|---|
| End bp | 453402 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638004938 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_611663 |
|---|
| Protein GI | 99078405 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.59768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATACCA TCGCCGCACT CTATCAATTC TCCCGCTTCC CGGATCCCGC TGCTCTCAAG
CCTGCGTTGC TCGCGCTGTG TCTGGAGCAC GACGTCAAAG GGTCCTTGCT GCTGGCCCAT
GAAGGGATCA ACGGCACGAT CGCCGGTCCC CGCGCCGGGA TTGATGCCGT GCTCGCACAT
ATCAAGTCCC TGCCGGGCTG CGCGGATCTG GACTGGAAAG AGGCCACTGC GGACCATCCG
CCCTTTGGCA AAATGAAGGT GCGTCTGAAA AAAGAGATCG TCACCATGGG TCAACCCGAT
GTCGATCCGC GTGCCTCGGT TGGACATTAC GTTGAACCAG AGGACTGGAA CGACCTGATC
CGTTCGGACG ACGTGGTGGT AATCGACACG CGCAACGACT ACGAGGTGGC GATCGGGACC
TTTGAGGGCG CCATCGACCC CAAGACCGAG AGCTTTCGCG AATTCCCGCA GTGGTGGGAG
GAAAACAAGG ACCGCTTTCA CAACAAACGT GTGGCGATGT TCTGCACCGG CGGCATCCGC
TGTGAAAAAT CCACGAATTT TCTGCTCGGG CAGGGCGTCG AGGATGTCTA CCACCTAAAA
GGTGGAATCC TGCGCTACCT CGAAGAGGTC CCGCAGGACC AGAGCAGCTG GCAGGGCGAA
TGTTTCGTCT TTGACAACCG CGTCTCGGTC GGTCACGGGC TCAAAGAAGG CCCGCATGAG
CTGTGCCATG GCTGCCGCCG CCCGATCCTG CCCGAAGACA AAGAACGCCC GGAGTTCGAG
GCGGGCGTTT CCTGTCACAA TTGCATCAAT GAGACCAGCG CGCAGGACAA AATGCGCTTT
CGCGAGCGTC AGAAACAGAT CCGGCTCGCG CGCGAGCGCG GCGATATTCA AGAAGCCTGA
|
|---|
| Protein sequence | MYTIAALYQF SRFPDPAALK PALLALCLEH DVKGSLLLAH EGINGTIAGP RAGIDAVLAH
IKSLPGCADL DWKEATADHP PFGKMKVRLK KEIVTMGQPD VDPRASVGHY VEPEDWNDLI
RSDDVVVIDT RNDYEVAIGT FEGAIDPKTE SFREFPQWWE ENKDRFHNKR VAMFCTGGIR
CEKSTNFLLG QGVEDVYHLK GGILRYLEEV PQDQSSWQGE CFVFDNRVSV GHGLKEGPHE
LCHGCRRPIL PEDKERPEFE AGVSCHNCIN ETSAQDKMRF RERQKQIRLA RERGDIQEA
|
|---|
| |