| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3427 |
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| Symbol | |
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| ID | 4075601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 449905 |
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| End bp | 450579 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638004936 |
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| Product | hypothetical protein |
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| Protein accession | YP_611661 |
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| Protein GI | 99078403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0468682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACAC CCTTGTTGAT CGTGGGCGCA GGCGAATTTG CCGACATCGC CTATGAGTAT
TTTACCTATG ACTCCGATTA TGACGTTGTG GGGTTTGCCG TCGAGGCCGC CTTTCGTGAG
GGCGACACCC ATTGTGGTCT ACCGCTGATC GATCTGGAGA CCGTCGAAGA TCATTTCGAT
CCTTTGGAAG TGAAAGCGCA TGTGGCCGTC ACCAACACCC AACTCAATCG CGTCAGAGAG
CGTCTGGTTG GGGTCATGCG AGAAAAAGGA TACGGGCTCG CCAACTACAT CAGTTCGCAT
GCCTTCGTGT GGCGTACCGC CGAGCTCGGC GAGAATGTTT TCATCTTTGA AAACAATGTT
GTGCAACACG GGGTCAAGAT TGGTGACGGT GTCGTACTAT GGAGTGGGAA CCACATCGGC
CACCAGACCG AGATTGGAGA GTTCTGCTTC CTCTCCTCGC ATGTCGTGGT GTCGGGGTAT
TGCAAGATCG GGCGGCGGTG CTTTGTCGGC GTCAATGCAT CCTTTGCCGA CAATATCGAG
ATCGGCGAAG ACTGCTTTGT CGGGCTTGCA ACAGTGGTCA ATAAGTCTTT CAAAGAGCCT
GGCCAACTCC TGACGGGGCA TCCGGCCGAA CCATCGCGGG TTAGCACCTA TCGTTACTTC
AAACTCAAGA ACTGA
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| Protein sequence | MTTPLLIVGA GEFADIAYEY FTYDSDYDVV GFAVEAAFRE GDTHCGLPLI DLETVEDHFD
PLEVKAHVAV TNTQLNRVRE RLVGVMREKG YGLANYISSH AFVWRTAELG ENVFIFENNV
VQHGVKIGDG VVLWSGNHIG HQTEIGEFCF LSSHVVVSGY CKIGRRCFVG VNASFADNIE
IGEDCFVGLA TVVNKSFKEP GQLLTGHPAE PSRVSTYRYF KLKN
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