| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3417 |
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| Symbol | |
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| ID | 4075591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 438048 |
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| End bp | 439391 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004926 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_611651 |
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| Protein GI | 99078393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.72438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAAC ATACGTTGAA AAAGGGTCTC GATGTTCCGG TGCTGGGGGC ACCTGACACC
AAGATCGAAG ACGCAGCAAA AGTCCGGACA GTCGCCATCA TCGGCCAAGA CTACATCGGA
CTTAAGCCCC GACTCTCGGT TCAAGAAGGC GACGTCATTG CAGCAGGTGC CCCGGTGCTT
GCGCATAAGG ACACGCCAGA GGTTCAGGTG ACCGCACCGG TTTCGGGACG CGTCAAGGCC
ATCAATCGCG GCGCGCGCCG GGTGTTGGTC AGCGTTGAGA TCGAGGTGGA CGAGGCCGCG
GCAGAGCCGG TGGATTTCTC GACCATTGGC GATGACAGCA GTGCCGAGGG TCTGCGCACG
CGACTGTGCG CATCGGGCCT CTGGACCTCG TTTCGCACGC GTCCCTATTC CAAAGTGCCC
GCGCCGGACA CAGCACCTGC GGCGATCTAT GTCACCGCCA TGGACAGCGA ACCCCTGTCG
GGCGATGCGG CCACGATCAT CAACGATCAG GCAGAGGCTT TTGCGCGGGG GCTTCAGGCC
GTCACGCTCC TGACCGAGGG CAAAACCTAC CTGTGCCAAG ACAGCGGCGC CACCATCCCC
GGTGCGGATC TTGCCAGCGT TACTGCTGTC GGCTTTGCCG GCCCGCATCC GGCGGGTCTG
GCTGGAACGC ACATGCATTT CCTCGAGCCG CCCACCGCCG AAAAAACGGT CTGGACCATT
GGCTATCATG ACGTGATCGC CATCGGCCAT CTGTTGCTCA CGGGGCGCAT CAATAGTGAA
CGTGTCATTG CGCTCTCCGG CCCGAAATGC AGCCGTCCGC GCCTTGTGCG CACACTCAAC
GGTGCGTCCA TGACAGATCT TTGCGCCGAG GATCTCGGCG GCGAGGATCC GATCCGTGTC
ATCTCCGGCT CCATCCTGTC CGGTCGCGCT GGCGAAGGCA CAACCGCCTA TCTGGGCCGC
TACGCCCGCC AGATTACGCT GATCAAAGAA GACCGCGAGC AGATCCCGAT GGGCTGGATT
CGTCCGATGC CCTCGAAGTA TGCCGTGCAG CCGGTTCTGG GCTCTGCCTT CTCCAAGAAG
CTTCACGCGC TGACCTCGAA CCTCAACGGT GGGCGTCGCG CCATGGTGCC GATCGGCACC
TTCGAGCAGC TGATGCCGCA GGATTTCCTG CCCACGCAGC TCTTGCGGGC CCTCCTGGTG
ATGGACACCG ATCAGGCCCA GGCGCTTGGT GCGCTTGAGC TGGACGAAGA AGACCTCGGG
CTCTGCGGTT TTGCCTGCCC GGCCAAATAT GAATATGGCC TCGCCCTGCG CGACAGCCTC
AGCAAGATCG AAAGAGAGGG ATAA
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| Protein sequence | MQQHTLKKGL DVPVLGAPDT KIEDAAKVRT VAIIGQDYIG LKPRLSVQEG DVIAAGAPVL
AHKDTPEVQV TAPVSGRVKA INRGARRVLV SVEIEVDEAA AEPVDFSTIG DDSSAEGLRT
RLCASGLWTS FRTRPYSKVP APDTAPAAIY VTAMDSEPLS GDAATIINDQ AEAFARGLQA
VTLLTEGKTY LCQDSGATIP GADLASVTAV GFAGPHPAGL AGTHMHFLEP PTAEKTVWTI
GYHDVIAIGH LLLTGRINSE RVIALSGPKC SRPRLVRTLN GASMTDLCAE DLGGEDPIRV
ISGSILSGRA GEGTTAYLGR YARQITLIKE DREQIPMGWI RPMPSKYAVQ PVLGSAFSKK
LHALTSNLNG GRRAMVPIGT FEQLMPQDFL PTQLLRALLV MDTDQAQALG ALELDEEDLG
LCGFACPAKY EYGLALRDSL SKIEREG
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