| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3408 |
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| Symbol | |
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| ID | 4075582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 428668 |
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| End bp | 430182 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638004917 |
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| Product | malonyl-CoA synthase |
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| Protein accession | YP_611642 |
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| Protein GI | 99078384 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.787784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACC CTTTGTTTGA TCGCCTTTTC GGTGTTTACG CCGGCAAGAC GACCCCCTTC
TTGTATCTGG CAGATGGCCA GGTCTGGACG CACGCACGTT TTTTGGATCA GGTTGCCCAG
ATCGCACATG TGCTCATCAA GGCGGGCCTC ACGCCAGGGG ATCGCGTGGC CGTTCAGGTC
GAAAAATCCC CCGAAGCGCT TGCGCTTTAT GGCGCCTGCG TACAGGCCGG TCTGATCTTC
TTGCCGCTCA ATACCGCCTA TACCGCCGAT GAACTCTCGT ATTTCATCGA AAACAGTGGT
GCATCGCTTG TTATCTGCGA CGGCCAGAAC CAAAGCACGC TGGCCACGAT TGCTGAAGGT
CTGAACGCAA GTGTGGAGAC GCTGAACGCA GATGGAAGCG GCTCTTTGAT TGAGCGCGCA
GCGGCAATGG CAACGGACTT TGAGACCGTA GACCGCAGCG GCGATGATCT TGCCGCGTTC
CTTTATACGT CCGGGACGAC GGGACGCTCC AAAGGGGCGA TGCTGACGCA GGACAATTTA
CTGTCGAACG CTGAGACCTT GGTAAAGGAA TGGCGGTTCA CAGATAAAGA CGTGTTGCTG
CACGCCTTGC CGATTTTTCA CACGCATGGG CTTTTTGTGG CGAGCAATGT GACGCTTCTG
GCCGGAGGCG CGATGATCTT TTTGCCCAAG TTCGATCTGG ACCGCGTCAT CGCGCAACTG
CCCAAAGCGA CCAGTATGAT GGGCGTGCCT ACCTTCTATA CCCGCCTGTT GAGCGATCCG
CGCTTTACCA AAGAGCTGAC CCAACACATG CGCCTGTTCA TTTCAGGTTC CGCACCCTTG
TTGGCGGAAA CCCATATCCA ATTCGAAGAG CGCACTGGGC ATCGGATTCT CGAACGCTAC
GGCATGACGG AAACCAACAT GAACACCTCA AACCCCTACG ACGGAGAACG GCGTGCGGGC
ACTGTTGGCT TCCCACTGCC CGGTGTGGAG TTAAAGATCA CCAACCCGGA AACGGGTACC
TCACTGCCAC GAGGCGACAT TGGACAGATC GAAGTGCGCG GGCCAAACGT CTTTCAAGGA
TATTGGCAGA TGCCTGAAAA AACTGCCGCA GAACTGCGAG AGGACGGTTT TTTCATTACC
GGCGATCTCG GTATGATCGA CGAAGATGGC TATGTGCACA TTGTGGGCCG CAACAAGGAT
CTGATCATTT CGGGTGGGTA CAATATCTAT CCGAAGGAGA TCGAACTGGT GCTGGATGAA
CAGTCTGGCG TGTTGGAAAG CGCGGTTATC GGCGTTCCGC ACCCGGATTT TGGCGAAACC
GTGCTGGGAA TCATCGTCCC GGAAACGGGT ACCTCACCGG ACCTCGAGTC GATCATGACG
TCAGTTCAAG GCCAGCTTGC TCGGTTCAAA CATCCTCGCA AATTGATGGT TGTCGACGAA
TTGCCGCGAA ACACGATGGG GAAAGTTCAA AAGAACATCC TTCGAGACAG CTACAAAGAC
ATGTTTAGCG ACTGA
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| Protein sequence | MANPLFDRLF GVYAGKTTPF LYLADGQVWT HARFLDQVAQ IAHVLIKAGL TPGDRVAVQV
EKSPEALALY GACVQAGLIF LPLNTAYTAD ELSYFIENSG ASLVICDGQN QSTLATIAEG
LNASVETLNA DGSGSLIERA AAMATDFETV DRSGDDLAAF LYTSGTTGRS KGAMLTQDNL
LSNAETLVKE WRFTDKDVLL HALPIFHTHG LFVASNVTLL AGGAMIFLPK FDLDRVIAQL
PKATSMMGVP TFYTRLLSDP RFTKELTQHM RLFISGSAPL LAETHIQFEE RTGHRILERY
GMTETNMNTS NPYDGERRAG TVGFPLPGVE LKITNPETGT SLPRGDIGQI EVRGPNVFQG
YWQMPEKTAA ELREDGFFIT GDLGMIDEDG YVHIVGRNKD LIISGGYNIY PKEIELVLDE
QSGVLESAVI GVPHPDFGET VLGIIVPETG TSPDLESIMT SVQGQLARFK HPRKLMVVDE
LPRNTMGKVQ KNILRDSYKD MFSD
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