| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3396 |
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| Symbol | |
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| ID | 4075570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 415555 |
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| End bp | 416649 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004905 |
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| Product | ABC transporter related |
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| Protein accession | YP_611630 |
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| Protein GI | 99078372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.304213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.67181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TTACTCTGAC AGACGTGATC AAACGCTATG GCCAGCATCA GGCTGTGCAT
GGCATCAATC TCGATATTCA GGACGGTGAG TTCGTCGTCC TGGTTGGCCC CTCGGGATGC
GGAAAGTCCA CGACCCTGCG CATGATTGCC GGGCTTGAGG ATATCTCTGG TGGAGAGGTC
AAGATCGGTG GACGGGTGGT GAATGATCTC CCCCCGCGCG AGCGCAACAT CTCCATGGTG
TTTCAGAATT ACGCGCTTTA TCCGCACATG ACCGTGCGCG AGAACCTCGG CTTTTCACTG
AAGATTGCCA AGCGCCCTGA GGCTGAGATC GAACGCGCCG TCACAGAAGC CGCGCAAATT
CTCGGCCTGG ACGAGTTGAT GGAGCGCAAA CCTGCCGCGC TTTCTGGGGG GCAACGCCAG
CGGGTTGCCA TGGGGCGCGC GATCGTGCGT CAGCCGGATG TGTTCCTGTT CGACGAGCCG
CTCTCAAACC TTGATGCGAA ACTGCGTACT CAGATGCGGG TCGAGATCAA GAAGCTGCAC
CAGAAAGTCG GGAATACAGT GATCTATGTG ACTCACGATC AGGTCGAAGC AATGACGCTG
GCGGATCGGA TCGTGTTGAT GCGCGATGGT CATATCGTGC AGACTGGCAC ACCGCTCGAC
CTGTTCAATG CGCCAGTTGA TACCTTTGTC GCCACCTTTA TTGGCTCACC GCCGATGAAC
CTCGTTGATG GGATAGTCAC CGAAACCGGT GCGCTCCGAC TTGGTGATCA CATCACGTTG
CCGATGCCGA GCGAAGCCCG CGGTGCTGTG CGGCCAGGTC AGGAAATCAG CTTTGGTTTC
CGGGCCGACA ATCTGATGCC CGACGGCCAC TCGGTCGAGG AAAGCGGGCA GATGGCCCCG
CTGGAACTGG AGGTCGCCCT GACGGAGCCT CTGGGCACGG AAACACTTCT CTTTGCCGAG
TTTGCGGGCC GTGAGGTGCA GGCCAAGATG CTCAACCCGC GTCCCGTGCA GCCGGGCGAA
CGGCTGCCGT TTCATCTGAT GCTCGACAAA TGTCACGTCT TTGACCGCAA AAGCGGCAAG
GCGCTGAGAG GGTAG
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| Protein sequence | MTEVTLTDVI KRYGQHQAVH GINLDIQDGE FVVLVGPSGC GKSTTLRMIA GLEDISGGEV
KIGGRVVNDL PPRERNISMV FQNYALYPHM TVRENLGFSL KIAKRPEAEI ERAVTEAAQI
LGLDELMERK PAALSGGQRQ RVAMGRAIVR QPDVFLFDEP LSNLDAKLRT QMRVEIKKLH
QKVGNTVIYV THDQVEAMTL ADRIVLMRDG HIVQTGTPLD LFNAPVDTFV ATFIGSPPMN
LVDGIVTETG ALRLGDHITL PMPSEARGAV RPGQEISFGF RADNLMPDGH SVEESGQMAP
LELEVALTEP LGTETLLFAE FAGREVQAKM LNPRPVQPGE RLPFHLMLDK CHVFDRKSGK
ALRG
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