| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3392 |
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| Symbol | |
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| ID | 4075566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 412493 |
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| End bp | 413338 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004901 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_611626 |
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| Protein GI | 99078368 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.401918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC TGCGATATGG CCCTTTGGGT CAGGAAAAAC CCGGACTCCT TGATCAGGAC
GGCAATATCC GCGACCTCTC CGGGCAGGTT GCAGATATTG GCGCTGCGAC GCTCGGTGAT
GCGGGTCTCG ATGCCCTGCG CGCTCTTGAT CCCCAGAGCT TGCCTCTGGT CGAGGGCACG
CCTCGGATCG GCGCTTGTGT CGGACAGGTT GGAAAATTCA TCTGCATCGG TTTGAACTAC
GCAGACCATG CCGCCGAAAG CGGCATGAGC CTGCCTGAGG AGCCGGTGAT CTTCTTCAAG
GCGACCTCTG CTATCTGCGG GCCCAACGAT GCTGTCGAAA TTCCGCGAAC CTCGGTCAAG
ACCGACTGGG AAGTGGAACT GGGCGTGGTG ATCGGAAAGA CGGCGAAATA CATTGGCCGA
GATGAGGCGC TGGATCACGT TGCGGGCTAC TGCGTGGTGA ATGATCTCTC GGAGCGTGAC
TTTCAACTGC ATCGCTCCGG CCAATGGGTA AAGGGCAAAT CCGCTGATAC ATTTGGTCCT
ATCGGCCCCT GGTTGGTGAC CCGCGACGAG GTCCCAGATC CGCAGAACCT GGCGATGTGG
CTCGAGGTCA ATGGGCATCG CTACCAGGAC GGGTCCACCC GGACGATGCA TTTTGATGTG
GCCACGGTGA TCTCGCATCT GTCGCAATTC ATGAGCTTGC AACCGGGTGA CGTAATTTCA
ACCGGTACGC CGCCGGGCGT TGGCATGGGG CAAACGCCCG AGACCTACCT GAAACCCGGT
GACGTGATGG AGCTGGGGAT CGCGGGGCTC GGTGTGCAGC GACAGGTGAC AGAGGCAGCA
GAATGA
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| Protein sequence | MKLLRYGPLG QEKPGLLDQD GNIRDLSGQV ADIGAATLGD AGLDALRALD PQSLPLVEGT
PRIGACVGQV GKFICIGLNY ADHAAESGMS LPEEPVIFFK ATSAICGPND AVEIPRTSVK
TDWEVELGVV IGKTAKYIGR DEALDHVAGY CVVNDLSERD FQLHRSGQWV KGKSADTFGP
IGPWLVTRDE VPDPQNLAMW LEVNGHRYQD GSTRTMHFDV ATVISHLSQF MSLQPGDVIS
TGTPPGVGMG QTPETYLKPG DVMELGIAGL GVQRQVTEAA E
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