| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3391 |
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| Symbol | |
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| ID | 4075565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 411219 |
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| End bp | 412496 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004900 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_611625 |
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| Protein GI | 99078367 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.404506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA TCACAGGCTT GCGCACCTAT GATCTGCGCT TCCCCACGTC AGAGGGGCTT
GATGGTTCCG ATGCGATGAA CCCCGATCCT GATTATTCCG CCGCTTATGT GATCTTGGAA
ACAGAAGGTA CGCATGAAGG CCACGGTCTG ACCTTCACCA TCGGGCGCGG CAACGAGATC
TGCATCGCGG CGATCAAGGC GCTTGGCGCC TTGGTGGTCG GGCTCGATCT GGATTGGATC
CGAGAAGACA TGGGCCGGTT TTGGCGCCAT GTGACGGGCG ACAGTCAGCT GCGCTGGATC
GGGCCGGACA AGGGGGCCAT TCATCTGGCG GCGGGCGCGG TCGTAAATGC GGTCTGGGAC
CTCTGGGCCA AGGATACAGG AAAACCCGTT TGGCGTCTTG TGGCGGATAT GTCGCCTGCC
GAGATTCTGC GATTGATCGA CTTTCGCTAT TTGACCGATG TGCTGGCGCC CGAAGAGGCC
TTGGACCTCC TCAAGGCTGC AGAACCCGGC AAGGAAGAGC GCATCGCGCG TCTTATAGAG
GAGGGGTACC CCTGCTATAC GACCTCAGCA GGATGGCTCG GCTATTCTGA TGAGAAGCTG
CGCCGCCTGT GCCGCGAGGC GCGCGCGGCG GGCTTTACCC ACACCAAATT CAAAGTGGGC
CGGGATCTGT CGGACGATAT CCGCCGCCTC ACCATCGCGC GTGAGGAACT CGGCGAGGAC
ATGAATATCA TGATCGATGC CAATCAGGTC TGGGAAGTTG ACGAGGCTAT CGACTGGGTG
AACCGCCTCG CCTTCGCCCG TCCATTGTTT ATCGAGGAAC CCACAAGCCC CGACGATGTG
TTGGGACACA AGGCCATCCG CGAGGGCGTG GCGCCGATCA AGGTTGCCAC CGGTGAGATG
TGTCAGAACC GGATCATGTT CAAGCAGTTC ATCGCCAGCG GCGCGCTCGA CATCGTGCAG
ATCGACAGTT GCCGCATGGG GGGACTGAAC GAGGTTCTAG CCGTCATGCT GGTGGCCGCG
AAATATGATC TTCCTGTCTG GCCGCATGCT GGGGGCGTTG GGCTTTGCGA ATATGTGCAG
CACATGTCCA TGATCGACTA TGTCGCGATC TGCGGGGAAA AAGACAGCAA ACGCATTGAA
TATGTCGACC ACCTGCATGA GCATTTCAAA CACCCCTGCA TTGTCACTGG CGGAGCGTAT
CAGGCGCCGC ATGCGCCCGG ATTTTCGATA GAAATGAAAG AAGATACGCT AGACGCGTTC
TTGTTTTCGG ACGGCTGA
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| Protein sequence | MTKITGLRTY DLRFPTSEGL DGSDAMNPDP DYSAAYVILE TEGTHEGHGL TFTIGRGNEI
CIAAIKALGA LVVGLDLDWI REDMGRFWRH VTGDSQLRWI GPDKGAIHLA AGAVVNAVWD
LWAKDTGKPV WRLVADMSPA EILRLIDFRY LTDVLAPEEA LDLLKAAEPG KEERIARLIE
EGYPCYTTSA GWLGYSDEKL RRLCREARAA GFTHTKFKVG RDLSDDIRRL TIAREELGED
MNIMIDANQV WEVDEAIDWV NRLAFARPLF IEEPTSPDDV LGHKAIREGV APIKVATGEM
CQNRIMFKQF IASGALDIVQ IDSCRMGGLN EVLAVMLVAA KYDLPVWPHA GGVGLCEYVQ
HMSMIDYVAI CGEKDSKRIE YVDHLHEHFK HPCIVTGGAY QAPHAPGFSI EMKEDTLDAF
LFSDG
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