| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3378 |
|---|
| Symbol | |
|---|
| ID | 4075277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 393528 |
|---|
| End bp | 394079 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638004886 |
|---|
| Product | sarcosine oxidase gamma subunit family protein |
|---|
| Protein accession | YP_611612 |
|---|
| Protein GI | 99078354 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATAGAT TGAAGCCTCT CACACCCATG GGTGCGGTGA CACCGCGTGT GGATACGATC
GGAACGCTGA CAATCACTGA AATCGTGCAC CAGGCACTGG CCTCCATTGC TGCGCGCGAG
GGACAGATGG AGGCGCTGCA ACAGAAGCTC CCACTTCCCT TGCCCGATGT GGGCAAGACC
AGAACCCAAG GCGCATTCAG CGCTTTCTGG ACCGGTCCTG CGCAGTGGAT GATCGTAGCC
AACCACGACC AGCACGAGGC ACTTGCATAC GAGATCAAGC AGATGGTCGG GCAGACGGCT
TCGGTCGTGG AACAGACCGA TGGGTGGTGC CGCTTTGATG TCTCGGGTGC AGCGCTTTAC
GATCTCTTTG AACGTCTCTC AAGCGCGCCA GTGCGGCGTA TGACCAAGGG CGATGTGATC
CGCGGCACGG TCGAACGTCT GGGGGCATTC CTTTGGCGAC TCGATCAGGA TCATATGGCC
GTGATCGCCC CGCGTTCCTC TGCGGCGTCA CTACATCACG CTCTGATTGC CGCAGCCCGA
TCGATCGCCT GA
|
|---|
| Protein sequence | MHRLKPLTPM GAVTPRVDTI GTLTITEIVH QALASIAARE GQMEALQQKL PLPLPDVGKT
RTQGAFSAFW TGPAQWMIVA NHDQHEALAY EIKQMVGQTA SVVEQTDGWC RFDVSGAALY
DLFERLSSAP VRRMTKGDVI RGTVERLGAF LWRLDQDHMA VIAPRSSAAS LHHALIAAAR
SIA
|
|---|
| |