| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3374 |
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| Symbol | |
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| ID | 4075273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 387083 |
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| End bp | 388558 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004882 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_611608 |
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| Protein GI | 99078350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.337821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA AACTGTTGAA ACCATTTTCG AATGTATTGG GGTGGAATGC CAAGAAGGGC
CTCGTGGAGC CGAGCGACTC CAGCGACCCC TCGCGCGGGG ACGCCGAAAC GCAGCGCGAT
CCGGTTGAAG AGACCGATCC TATTTCGCGT GGTGACACCC AGCCCGATAC CGAGACAAAT
GATGGGCGCG ACACAGGCGG GTCTGACACG CCGGATCGCG GGGACGATCG GGACCCAGAT
CGTGGCGGCA ATGATGGGCC TCCGTCGATG TCGGTCAGCG CCAATATTTT TACGCGCTTT
GATACCAACC TGGCTGAGCC CGGCTTTCTA ACGCCCGGCC TGGCCAATGG TTTGAACATA
ACGCCCGGCA ACATCTGGAT CGATTGGAAT GGCGAGAACG CATTCGAAGG CACGCATGGG
GTCGACAAGG CCTGGGGCCT TTGGGGTGAC GATGACATCT ACCTCTACGA TGGCAACGAT
GTCGCCTATG GAGGTGCGGG GAATGACCTG CTTCATGGTG GCCGCGGCAA TGATGCGCTC
TATGGCGGGA TTGGCAATGA CTTCATCATC GGCGATGTCG GTAGTGACAC CATCGACGGT
GGCAGTGGAA ATGACAGGCT TCAAGGTGGC CGTGGCAATG ACATGATCAA CGGCGGCGAC
GGCAATGACC GGATCCTCGG AGAAGAAGGT CGCGACGTCG TGCGTGCCGG AGACGGTGAC
GATTTCATCG AGGGCGGTGA CGACAATGAC CTTATGTGGG GCGATGAGGG CCGCGACACC
ATGTTGGGCG GCGATGGGGA TGACCAAGTT TTTGGCGGCA TAGGCAATGA CCTGCTGCAA
GGTGGGCTTG GCAACGATCA TATGGAAGGC GGTGGTGGAG CCGATGTGCT GGTTGGCGAT
CAGGGGAACG ACCTCATCAA CGGCGGCAGC GGCAACGACA TGATGACTGG CGACCTTGGC
AATGACGAGC TGAATGGCGG GACCGGCAAT GACACTATGG AGGGTGGCGC CGGCAACGAC
ATCATGCGCG GTGGCGAAGG CAGCGATTTC ATCTACGGTG ACGGTGGCAA CGACTACATT
CAGGGCGGTG GTGGCAATGA CCATATTTAT GGTGGGACCA ACTCTGCCGG TGACATCGGC
GACTATCTGT TCGGCGGCGA GGGGTATGAT CTGTTCTACT TCGACTTCGG GGACAGTGGT
GCCAACGGTG GTCCTCGCGA TGTAATTCAG GACTTTTCGG CTGGTGGCGG GGATCTCATG
GTCTTTCAAG GGTTTGGCGC GACGACCTGG CGTGGAGGCG ATGGTTTCTC GGGTGGAGTT
GGAGCCGAAG CCTACTTCGA GCAGACGGTG AGCGACGAGT TCGGTGCGGT CACGCATGTT
TACCTGCGAG ACGACATCGG ACATGAGGCA GATCTTTCAC TGACCTTGCT GGGTTACATT
GATCTCACCG AGAGCGACGT CTTTGTGATC GCCTAA
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| Protein sequence | MTIKLLKPFS NVLGWNAKKG LVEPSDSSDP SRGDAETQRD PVEETDPISR GDTQPDTETN
DGRDTGGSDT PDRGDDRDPD RGGNDGPPSM SVSANIFTRF DTNLAEPGFL TPGLANGLNI
TPGNIWIDWN GENAFEGTHG VDKAWGLWGD DDIYLYDGND VAYGGAGNDL LHGGRGNDAL
YGGIGNDFII GDVGSDTIDG GSGNDRLQGG RGNDMINGGD GNDRILGEEG RDVVRAGDGD
DFIEGGDDND LMWGDEGRDT MLGGDGDDQV FGGIGNDLLQ GGLGNDHMEG GGGADVLVGD
QGNDLINGGS GNDMMTGDLG NDELNGGTGN DTMEGGAGND IMRGGEGSDF IYGDGGNDYI
QGGGGNDHIY GGTNSAGDIG DYLFGGEGYD LFYFDFGDSG ANGGPRDVIQ DFSAGGGDLM
VFQGFGATTW RGGDGFSGGV GAEAYFEQTV SDEFGAVTHV YLRDDIGHEA DLSLTLLGYI
DLTESDVFVI A
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