Gene TM1040_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3361 
Symbol 
ID4075260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp372262 
End bp373152 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content57% 
IMG OID638004869 
Productaldo/keto reductase 
Protein accessionYP_611595 
Protein GI99078337 
COG category[R] General function prediction only 
COG ID[COG4989] Predicted oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.308056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCG TAAACCTGAC ATCTGATCTG TCGTTCAGCC GCCTTGTTTA TGGGATGTGG 
CGCATCGGAG ATGTAAAAGA CACCTCCCCC GCCCACGTCG AAGCAAAGAT CGCAGCCTGT
CTCGAGCAAG GCATCACCAC CTTTGATCAG GCCGACATCT ATGGGGATTA TGGCGCGGAG
GCTATCTTGG GTGGAGCCTT GAAGGCGAAC CCTTCTCTGC GCGACCAGAT GGAGATCGTG
ACCAAGTGCG ACATCGTCGC CCCGATTGGT CGATACGCCG ACAAATCGGT GAAATACTAC
GACACATCGC GCGCGCACAT CATGCACTCG GTTGAAACCT CACTGTCCGA GATGGGCATC
GAGCAGATCG ACCTTTTGCT GATCCACCGT CCCGACCCGC TGATGGATCA CAATGAGACC
GGCGCGGCGC TCGATGAACT GGTGACCTCC GGCAAGGTGC GCGCCGTCGG CGTGTCCAAC
TTCCGTCCAT GGGATTGGTC GCTGTTGCAG TCGGCGATGA AGACACCACT TTCGACCAAC
CAGATCGAAA TCTCTTTGGG AGAGGTCTCC CCCTTCACCA ACGGCGATCT GGCTTTCCAT
CAGCAGCACA ATCACCCCGT TATGGCCTGG TCGCCGCTGG GCGGTGGCGG GCTGATGACC
GCTACAAGTG AGCTTACCAA ACGGATGGAT GCAATTGCCG CAGCGCAGGG TGTGGATCGC
GCTGCTGTCG CGGTTGCCTT TCTGCTGCGC CACCCGGCAC AGATCCTGCC AGTTTTGGGG
ACCAATAACC TCGACCGTAT CAAAACGATC TCAGACGCAA CCAAAGTCGA GCTGGATCGT
GAAACCTGGT TCAAACTCTA TGAGGCCGCA TTGGGCAAAG AGGTGCCATG A
 
Protein sequence
MDRVNLTSDL SFSRLVYGMW RIGDVKDTSP AHVEAKIAAC LEQGITTFDQ ADIYGDYGAE 
AILGGALKAN PSLRDQMEIV TKCDIVAPIG RYADKSVKYY DTSRAHIMHS VETSLSEMGI
EQIDLLLIHR PDPLMDHNET GAALDELVTS GKVRAVGVSN FRPWDWSLLQ SAMKTPLSTN
QIEISLGEVS PFTNGDLAFH QQHNHPVMAW SPLGGGGLMT ATSELTKRMD AIAAAQGVDR
AAVAVAFLLR HPAQILPVLG TNNLDRIKTI SDATKVELDR ETWFKLYEAA LGKEVP