| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3355 |
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| Symbol | |
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| ID | 4075254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 367612 |
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| End bp | 368055 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004863 |
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| Product | Sel1 repeat-containing protein |
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| Protein accession | YP_611589 |
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| Protein GI | 99078331 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.355214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.280388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAA CCACCGGTTT TGCTGAAATC GAAAAGGCGC GGGACCTGAT GGAGGCGGGC
GACTTTGAGG ACGCCAAGCA GGAACTTTGG CCAGCTGCGC GATCCGGCAA TGCTGATGCC
GAGGAATTGA TCGGCGTCAT GTATGCCATG GGTCTGGGCG TTGAACGTGA CGACGCCCGC
GCCTTTGAAT GGTACCTGCG CAGCGCCATG AAAGGACATC CCGGCGCGCA GTCCGGCATT
GGCTGGTACT ATGAGGTTGG GCGCGGCATG CCCGCCCCGG ACCTGGTGCG CGCCTACATG
TGGTACACCC TGTCCGCCAT CGGTGGAGAC CCCGACGCTG CGATCAGTCT TGAAGAAGTG
GTCAAAAAGA TGACCCCAGC GCAGATTGAA AAAGCGCATA TCCTTGTCTC CGATTACAAG
GTCTGGATGT ACCCGTTCAA TTAA
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| Protein sequence | MIATTGFAEI EKARDLMEAG DFEDAKQELW PAARSGNADA EELIGVMYAM GLGVERDDAR
AFEWYLRSAM KGHPGAQSGI GWYYEVGRGM PAPDLVRAYM WYTLSAIGGD PDAAISLEEV
VKKMTPAQIE KAHILVSDYK VWMYPFN
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