| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3353 |
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| Symbol | |
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| ID | 4075252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 365203 |
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| End bp | 366228 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004861 |
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| Product | hypothetical protein |
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| Protein accession | YP_611587 |
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| Protein GI | 99078329 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.215821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.199768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAC AATCCATCGC GCCACGCGGG CGCTTCGTCG CGCGTGCGTT TCTGCTAAAG
GCGCGCGACA TCGGCCCGGG GCTTGCTCTT GCCGCCATGA TCGCAATGGC CGCGCAGTTC
ATCTCGGACC ACTATGGCGC GCCAGTGATG CTGATGGCGA TCCTTCTGGG CATCCCTTTC
CAGTTCCTGT CGCAAGAGCC TCGCACCGGT CCTGGCATTC AATTTGCGGC GCGCGTCGTG
TTGCGCGTCG GGGTCGCCTT ATTGGGGCTG CGCGTGAGTG TCGAGATGAT CCATGGGCTT
GGGATGGAGT TCATTCTTGT GGTCTTTGCC GGGGTGTTTT TGACCATCAT ATGCTCCATC
GTATTGGCAC CAATGCTCGG CAAAGACCGG CTCTTTGGGT TTTTGACCGG GGGTGCTGTT
GCGATCTGCG GGGCTTCCGC GGCCCTTGCA ATCTCATCAG TTTTGCCAAA GACCCAAGAT
AGTGAGCGCA ACCTGAGCTT TACGGTAATC GCGGTGACGT TGATGTCGAC GGTTGCTATG
ATCTTCTATC CAATCCTGGC CGAGAGCCTG GGATTGGATG CGCGTCATGC AGGTGTCTTT
CTTGGTGGCA CGATCCATGA TGTCGCGCAG GTTGTTGGCG CGGGGTATTC GATCGACACC
GAGACAGGCG ATTTTTCTAC CGTTGTCAAA CTGTTCCGGG TCACATTACT GGCGCCGATC
GTATTCCTCG GCGCGCTGGT CCTGCGCAAT CAAGTCCCTG CTGGCGCCAA GCGTCCGCCG
TTGATCCCCG GTTTTGTTTT GGCCTTCCTG ATTTTCGCGG CGCTGAACTC GATGCATTTG
ATCCCAGAGG TGCTGGTGCA GCCAAGCGAT ACGCTGTCGC GCGCAGCGCT TGTGACGGCG
GTCGCTGCAG TGGGAATGAA GACTTCCATC GGCGAGTTGC GCTCGCTAGG GGGGAGCTCC
GTTGCAATGA TCGTTGCGCA GACAATTGGA CTTGCGGTGT TCGTGCTGGC CTTTGTCGTG
ATGTGA
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| Protein sequence | METQSIAPRG RFVARAFLLK ARDIGPGLAL AAMIAMAAQF ISDHYGAPVM LMAILLGIPF
QFLSQEPRTG PGIQFAARVV LRVGVALLGL RVSVEMIHGL GMEFILVVFA GVFLTIICSI
VLAPMLGKDR LFGFLTGGAV AICGASAALA ISSVLPKTQD SERNLSFTVI AVTLMSTVAM
IFYPILAESL GLDARHAGVF LGGTIHDVAQ VVGAGYSIDT ETGDFSTVVK LFRVTLLAPI
VFLGALVLRN QVPAGAKRPP LIPGFVLAFL IFAALNSMHL IPEVLVQPSD TLSRAALVTA
VAAVGMKTSI GELRSLGGSS VAMIVAQTIG LAVFVLAFVV M
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