| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3350 |
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| Symbol | |
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| ID | 4075249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 362399 |
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| End bp | 363241 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004858 |
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| Product | myo-inositol catabolism IolB protein |
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| Protein accession | YP_611584 |
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| Protein GI | 99078326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.497522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.203778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTG CGCCCCATGA CAACCAAAAC AAACCTATCG TAGACGCAGA GCATGATTTG
GTGCCGCTGA ACTACTTCAA CATCGTAAAG CTCAGGCGAG GAGAGGTGTT TGAATACGCC
GTACCCGGCT ATGAAACCTG CGTTGTGCCC GCCACGGGCA CCGTCGATAT CGACGTCGAG
GGCGCGATCT ATCCCGACCT TGGCAATCGC ACCGAAGATG TGTGGGATGG CGAGCCGGAG
GGTGTTTATG TGCCCGTTGG AGCCAAGGTG CGCATCACCT GCAAAACCGA CGTTACCGAG
ACCTTTATCG CCGGTGCAAA ATACGACAAG GTGCTGGAGC CCTTCGACGT GCGCGCGGAT
GCGCTGGATG TTGTACAGTA TGGGTCTGAC GACACGAAGA CGCATCGCAA GATCAAGCAT
ATCCTGGGCG CGAACCACCA TGACAAAGTA GGTCGTCTCT TGGTGAGCGA GCTCTATACA
GTTGGGGAGG GCGGCTGGTC CGGGTTCCCG TCGCACAAGC ACGACACCGA CCGCCTGCCT
GATGAGACCC GCCACGACGA GACCTATAAT TTCCGTTTCA AGCCAAACTA TGGTTCCGGC
GTGCAGATGC TTCAGCGCGA AGACAATCAA CCTGGCGACG CCTATCACAT CATGGACGGA
TCGACGGTCC TGATCGACAA GGGCTATCAC CCTTGCGCGG TTCTGCCGGG ATACCAGATG
TATTACTTTA CCATTCTGGG TGGCCTCAGC CAGCGAAGCC TCAAACAGTA TTTCCAACCC
ACCCATGCCG AGCAGCTGCA CACGATTCCC GGCATCATGG ACATGGTGGC AAAGTTCAAA
TGA
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| Protein sequence | MHIAPHDNQN KPIVDAEHDL VPLNYFNIVK LRRGEVFEYA VPGYETCVVP ATGTVDIDVE
GAIYPDLGNR TEDVWDGEPE GVYVPVGAKV RITCKTDVTE TFIAGAKYDK VLEPFDVRAD
ALDVVQYGSD DTKTHRKIKH ILGANHHDKV GRLLVSELYT VGEGGWSGFP SHKHDTDRLP
DETRHDETYN FRFKPNYGSG VQMLQREDNQ PGDAYHIMDG STVLIDKGYH PCAVLPGYQM
YYFTILGGLS QRSLKQYFQP THAEQLHTIP GIMDMVAKFK
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