| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3347 |
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| Symbol | |
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| ID | 4075246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 358216 |
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| End bp | 359319 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004855 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_611581 |
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| Protein GI | 99078323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0144127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.198218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA TCGGTATCGG TATCCTTGGG GGTGGCTACA TGGGCAAGGC GCATGCGGTG
GCCATGGCCG CGGTCGGAGC GGTCTTCAAC ACGGCTCTTC GCCCTCGCTT GGAAATGGTC
TGCGCTTCTT CTCCAGATAG TGCCGAGCGC TATCGGCAGG CCTATGGTTT TGCCCGTGCG
ACCGCGGATT GGAGAGAGCT TGTTCACGAT CCACGCGTGG AAGCGGTAGT CATTGCTACG
CCACAAGAGG TTCATCGTCA GATCGCAGAG GCATGCTTTG CGTTGGGTAA ACCGGTGCTG
TGTGAAAAAC CCATGGGTGC ATCGCTCGCG GACAGTGCAG CCATGGTCGC GGCCGCCGAA
GCCTCCGGAG TCGCGAATAT GGTGGGTTTC AACTACATCC GCACCCCTGC GAGCCAATTT
GCCCGCGCCC TGGTTGCTGC CGGTGACATT GGTGAGATCA CCTGGTTCCG CGGCGAACAC
ACCGAGGATT TTTATGCTAA CCCCGAGACC CCGGCGAGCT GGCGAACCAG TGGCATGGCA
AATGGAACCA TGGGGGACTT GGCGCCACAT ATGGTCAATG CGGCACTGGC ACTGATCGGA
CCGATCGCGC GTGTCATGGC TGAGGTTGAA ACCGTTCACA AAGAACGACC GGGCGGCCAG
GTCACAAATG ACGATCACGC TCAGATGATG TGCCGCTTTG AGAACGGGGC CATGGGGCAG
ATGTATTTCA GCCGCATCGC GACAGGACGC AAGATGGGCT ATGCCTATGA GATCACAGGA
ACAAAAGGTG CGATCCGCTT TGATCAAGAA GATCAGAACG CGCTGTGGCT CTATCGTATG
GAAGGTCCAG AAGCAGAGCG AGGATTCCGC AAGATCCTCA CTGGTCCCGC CCACCCGGAT
TACGAACCTT TCTGTCAGGG GCCGGGGCAC GGAACGGGCT ATCAGGACCA GATCATCATT
GAGGCGCGGG ATTTCCTGCG CGCGATCGAG ACCGGTGAAG CGCAGTGGCC CACGTTTCGC
GACGGGCATG ACGTAAACCG GGTAATCGCT GCGGGGCTGG CCGCATCCGA GAGCAAAACC
TGGAAAGATA TCAAAGATTT CTAA
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| Protein sequence | MSEIGIGILG GGYMGKAHAV AMAAVGAVFN TALRPRLEMV CASSPDSAER YRQAYGFARA
TADWRELVHD PRVEAVVIAT PQEVHRQIAE ACFALGKPVL CEKPMGASLA DSAAMVAAAE
ASGVANMVGF NYIRTPASQF ARALVAAGDI GEITWFRGEH TEDFYANPET PASWRTSGMA
NGTMGDLAPH MVNAALALIG PIARVMAEVE TVHKERPGGQ VTNDDHAQMM CRFENGAMGQ
MYFSRIATGR KMGYAYEITG TKGAIRFDQE DQNALWLYRM EGPEAERGFR KILTGPAHPD
YEPFCQGPGH GTGYQDQIII EARDFLRAIE TGEAQWPTFR DGHDVNRVIA AGLAASESKT
WKDIKDF
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