| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3341 |
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| Symbol | |
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| ID | 4075240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 352034 |
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| End bp | 352822 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004849 |
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| Product | ABC transporter related |
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| Protein accession | YP_611575 |
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| Protein GI | 99078317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00439567 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.282749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCCG AACACGCACC CATCATCGAG ATGAAGAATA TCGAGAAGCA TTTCGGCAGC
GTTATCGCTT TGGCTGGCGT TTCTCTCGAG GTCTTCCCCG GTGAATGTCA TTGTCTGTTG
GGCGACAACG GGGCGGGCAA ATCGACCTTC ATCAAAACCA TGTCCGGCGT CCACAAGCCG
ACCCATGGCG AGATCTACTT TGAAGGAAAG CCCATGAGTT TCGGCGACCC TCGCGATGCG
ATCTCGGCTG GCATTGCAAC GGTGCACCAG CATCTGGCAA TGATCCCCTT GATGTCCGTC
AGCCGGAACT TCTTTATGGG CAACGAGCCA ACAAAGAAGA TCGGGCCGTT GAACTTCTTT
GACCATGATT ACGCCAATCA AGTGACTATG GATGAGATGC GCAAGATGGG GATCAACCTG
CGCGGCCCGG ATCAGGCCGT GGGCACCCTG TCGGGTGGGG AGCGTCAGAC GGTCGCCATC
GCGCGCGCGG TACATTTCGG AGCCAAGGTG CTGATCCTCG ATGAGCCCAC ATCGGCGCTA
GGTGTGCGCC AGACTGCAAA TGTGCTCGCC ACCATCGACA AGGTTCGCAA GCAAGGTATC
GCAGTGGTTT TCATCACCCA TAATGTGCGC CATGCGCTTG CAGTAGGGGA CCGTTTCACT
GTGCTAAACC GAGGTCAGAC ATTGGGGACC GCGCAGCGCG GGCAAATTAC CCCCGAAGAA
CTGCAAGATC TGATGGCGGG CGGACAGGAG CTCGTCGCGC TCGAAGGCAG TCTTGGCGGA
ACCGTCTAA
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| Protein sequence | MASEHAPIIE MKNIEKHFGS VIALAGVSLE VFPGECHCLL GDNGAGKSTF IKTMSGVHKP
THGEIYFEGK PMSFGDPRDA ISAGIATVHQ HLAMIPLMSV SRNFFMGNEP TKKIGPLNFF
DHDYANQVTM DEMRKMGINL RGPDQAVGTL SGGERQTVAI ARAVHFGAKV LILDEPTSAL
GVRQTANVLA TIDKVRKQGI AVVFITHNVR HALAVGDRFT VLNRGQTLGT AQRGQITPEE
LQDLMAGGQE LVALEGSLGG TV
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