Gene TM1040_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3337 
Symbol 
ID4075236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp347840 
End bp348940 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content61% 
IMG OID638004845 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_611571 
Protein GI99078313 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.853929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.657426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TTTTTGACCC CATAAAAGTG GGCGCGCTTT CGCTTCCGTC CCGGATTGCC 
ATGGCTCCAA TGACGCGCAG CCGGACGGAC CAGCCCGGAA ACCTCCCCAA CGACATGATG
GCGGCGTATT ATGCTCAACG GGCCAGTGCC GGGCTTATCA TCACAGAAGC CACCCAGATC
AGCCGCCAAG GACAAGGCTA TTCCTTCACG CCGGGCATTC ATTCCGATGA TCAGGTCGCA
GGATGGCGCG TGGTTACGCA GGCGGTTCAT GAGGCAGGCG GACGCATTGT GAACCAGCTC
TGGCATGTTG GCCGGATGGG CCACGGAATG TTCCATGCCG ATGGGCTGCC TGTCGCCCCT
TCGGCGATAG CACCAGATGC AAGCGTGTGG GTCGTCGATC CCAAAACCAA CAGGGCCGGC
ATGGTGGAAT GCCCGGTGCC ACGTGCGCTG AAGACGACCG AGATCGCGGA GGTTGTTGCG
GACTATGCTG CGGCTGCGCG CAATGCAAAG GTGGCCGGGT TTGATGGCGT CGAGATCCAC
GCAGCCAATG GGTATCTGAT TGATGCGTTC TTACGTTCCA GTTCGAACAA ACGGCAGGAC
CGCTACGGTG GCAGCGTGCA GAACCGCATC CGGTTTGCCA TCGAGGTGGT CGAGGCCGTC
GCAGCGGAAA TCGGTGCGGA TCGCGTCGGG CTGCGGATCT CGCCTTTTAT CACCCAGCGT
GGAATGGACG ATCCCAGCGC GCCCGAGACG ATTCTTGAGA TGGCCAAAGC GCTGGCGCGT
ATCGGGATCG CCTATATCCA TATCGCCGAG GCCGATTGGG ATGATGCTCC TGAAACACCG
CGCGCCTTTC GCGCGGCTCT GCGTGAGGTG TTTTCCGGCA GCATCCTTGT CGCCGGAGGC
TACGACAAAG AAAGGGCCAA GGTGATCTTG GACGCTGGTC TGGCGGATGT GGTGGCCTTT
GGTCGTGCGT TCGTCGCCAA CCCCGATCTG CCGCATCGCT TTGCCCAGGA TTTGCCGCTG
TCCGCATTTG ACAGCGAGAC GCTTTTTGGC GGCGATCATC AGGGCTATAC AACCTATGGG
CCCTATGCGC CGGGAGCTTG A
 
Protein sequence
MTTLFDPIKV GALSLPSRIA MAPMTRSRTD QPGNLPNDMM AAYYAQRASA GLIITEATQI 
SRQGQGYSFT PGIHSDDQVA GWRVVTQAVH EAGGRIVNQL WHVGRMGHGM FHADGLPVAP
SAIAPDASVW VVDPKTNRAG MVECPVPRAL KTTEIAEVVA DYAAAARNAK VAGFDGVEIH
AANGYLIDAF LRSSSNKRQD RYGGSVQNRI RFAIEVVEAV AAEIGADRVG LRISPFITQR
GMDDPSAPET ILEMAKALAR IGIAYIHIAE ADWDDAPETP RAFRAALREV FSGSILVAGG
YDKERAKVIL DAGLADVVAF GRAFVANPDL PHRFAQDLPL SAFDSETLFG GDHQGYTTYG
PYAPGA