Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3337 |
Symbol | |
ID | 4075236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 347840 |
End bp | 348940 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004845 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_611571 |
Protein GI | 99078313 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.853929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.657426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC TTTTTGACCC CATAAAAGTG GGCGCGCTTT CGCTTCCGTC CCGGATTGCC ATGGCTCCAA TGACGCGCAG CCGGACGGAC CAGCCCGGAA ACCTCCCCAA CGACATGATG GCGGCGTATT ATGCTCAACG GGCCAGTGCC GGGCTTATCA TCACAGAAGC CACCCAGATC AGCCGCCAAG GACAAGGCTA TTCCTTCACG CCGGGCATTC ATTCCGATGA TCAGGTCGCA GGATGGCGCG TGGTTACGCA GGCGGTTCAT GAGGCAGGCG GACGCATTGT GAACCAGCTC TGGCATGTTG GCCGGATGGG CCACGGAATG TTCCATGCCG ATGGGCTGCC TGTCGCCCCT TCGGCGATAG CACCAGATGC AAGCGTGTGG GTCGTCGATC CCAAAACCAA CAGGGCCGGC ATGGTGGAAT GCCCGGTGCC ACGTGCGCTG AAGACGACCG AGATCGCGGA GGTTGTTGCG GACTATGCTG CGGCTGCGCG CAATGCAAAG GTGGCCGGGT TTGATGGCGT CGAGATCCAC GCAGCCAATG GGTATCTGAT TGATGCGTTC TTACGTTCCA GTTCGAACAA ACGGCAGGAC CGCTACGGTG GCAGCGTGCA GAACCGCATC CGGTTTGCCA TCGAGGTGGT CGAGGCCGTC GCAGCGGAAA TCGGTGCGGA TCGCGTCGGG CTGCGGATCT CGCCTTTTAT CACCCAGCGT GGAATGGACG ATCCCAGCGC GCCCGAGACG ATTCTTGAGA TGGCCAAAGC GCTGGCGCGT ATCGGGATCG CCTATATCCA TATCGCCGAG GCCGATTGGG ATGATGCTCC TGAAACACCG CGCGCCTTTC GCGCGGCTCT GCGTGAGGTG TTTTCCGGCA GCATCCTTGT CGCCGGAGGC TACGACAAAG AAAGGGCCAA GGTGATCTTG GACGCTGGTC TGGCGGATGT GGTGGCCTTT GGTCGTGCGT TCGTCGCCAA CCCCGATCTG CCGCATCGCT TTGCCCAGGA TTTGCCGCTG TCCGCATTTG ACAGCGAGAC GCTTTTTGGC GGCGATCATC AGGGCTATAC AACCTATGGG CCCTATGCGC CGGGAGCTTG A
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Protein sequence | MTTLFDPIKV GALSLPSRIA MAPMTRSRTD QPGNLPNDMM AAYYAQRASA GLIITEATQI SRQGQGYSFT PGIHSDDQVA GWRVVTQAVH EAGGRIVNQL WHVGRMGHGM FHADGLPVAP SAIAPDASVW VVDPKTNRAG MVECPVPRAL KTTEIAEVVA DYAAAARNAK VAGFDGVEIH AANGYLIDAF LRSSSNKRQD RYGGSVQNRI RFAIEVVEAV AAEIGADRVG LRISPFITQR GMDDPSAPET ILEMAKALAR IGIAYIHIAE ADWDDAPETP RAFRAALREV FSGSILVAGG YDKERAKVIL DAGLADVVAF GRAFVANPDL PHRFAQDLPL SAFDSETLFG GDHQGYTTYG PYAPGA
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