Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3316 |
Symbol | |
ID | 4075721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 324875 |
End bp | 325687 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004824 |
Product | metallophosphoesterase |
Protein accession | YP_611550 |
Protein GI | 99078292 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0363179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.485488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCT TCATTCAACT CACTGACACG CATATCGTCT CTGAAGGTTC ACTCGCCTAC GGGCGCTCGG ATACCGCGAC GGCGCTGGCG CGCGCGGTGG ACACAATCAA CAGCAGACTG CCGGTCCTCG ATCCCGTGGA CTGCGTGGTG GTGACAGGCG ATCTAACGGA TCACGGCAGC GCGGAGGAAT ATGCACATCT GCGCCAACTG CTTGCGCCAT TGAACGTGCC TGTGCGGGCT ATCCCCGGCA ACCACGACAC GCGCGAGGCC ATGCGTGCAG CTTTCGCCAC CGAAGATTGG ATGCCTGCGT CTGGCCCAAT TCAATGGCAT CACGATTTTG GTCCCTTTGC GATGGTGGGC CTCGACACAT TGGTTGAGGG CGCTCCCTAC GGGATGGTGT GTGAGGCCGG GCTTGGGTTT CTGGCGCGTA GTCTGAAGAC CACCCCAGAC AAGCCGCTTG TGGTCGCCAC GCATCATCCT TGGATCCCTT CGGGTATGGC AGATATGGAC CGCAACAATC TGCGCAACGG GCCCGCAATG CTGGATCTTC TGCGTGAGCA TGACGCCCCG GTGCACGTAA TCTCCGGCCA CCTGCACCGC GCCATGAGCG CGCTCGTCGA CGGGGTGCTG CATCAGGTGG CCCCCGCACC CTGCCATGCG GTGCATCTCG ATCAGCGCGC AGATGCGGTA AACAGCCTTG TACTGGAGCC GGGTCAAGTG ACGGTCTACA ACTGGCACGA CGTCACAGGC GGCCTGGTCA GCGACTTGCT TCCCATCGGA GATTATCCCG GCCCTTGGCC CTTCTATGAC TGA
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Protein sequence | MTSFIQLTDT HIVSEGSLAY GRSDTATALA RAVDTINSRL PVLDPVDCVV VTGDLTDHGS AEEYAHLRQL LAPLNVPVRA IPGNHDTREA MRAAFATEDW MPASGPIQWH HDFGPFAMVG LDTLVEGAPY GMVCEAGLGF LARSLKTTPD KPLVVATHHP WIPSGMADMD RNNLRNGPAM LDLLREHDAP VHVISGHLHR AMSALVDGVL HQVAPAPCHA VHLDQRADAV NSLVLEPGQV TVYNWHDVTG GLVSDLLPIG DYPGPWPFYD
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