| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3294 |
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| Symbol | |
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| ID | 4075698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 298528 |
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| End bp | 300558 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004803 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_611530 |
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| Protein GI | 99078272 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTACG CAGTCTGCAA GTCAAGTCGT TTGGCCCAAT CCGAACCGCT CGCAGGCACC
CGCTCTCTAG ACCCCGATGC CCCCATGACC ACTGCGCCAC CTCTCTGGCA GCCGGACCTT
TCGGCCTGCC GTAAACCTCT GCTGTCCGAT TTTTTGACAC TGGCCGCAAA GACCAGTGAC
ACAACGATAC GGAGCTTTGC AGACCTACAC GCCTGGTCGG CCACGGAGCC GCAGAAGTTC
TGGCCGTTGG CGTGGGACTT TTGCAGGCTT GTGGGGGAAG CAGGCCCCGT CCCTCTGCTG
CCGCATCAAG ACCCGATGCA GGTGCGTTTC TTCCCCGAAG CCCGCCTCAA CATCGTAGAG
ACCTTTCCAA AGAATGCGGA TACGCGGGAG GCGATTGTCT TTATCGGCGA GGATGGCCGT
CGCACGGTCT GGAGCCGCGC CGATCTGAAG CGAGAGGTGG AGATGCTGGC GGCCGCCCTG
CGCGATGCCG GGATCGAAGC GGGCGATCAC GTCGCGGGCA TTGTGCCAAA CATGCCGCAG
GCAGTTGCCG CAATGCTGGC CACCGCCTCT CTCGGGGCGA TCTGGTCCTC CTGCGCGCCG
GAAGGCGGAC CAGACGTGGT GGTCGACCGA CTTGGCCAGA TCGCGCCCAA GCTTCTGTTT
GCAGCCGACG GGTATTTTTA CGGCGGCAAA CGGTTTGAAA CCCGTGCCGC CATAGCCGAG
ATTGCCGATC GGCTGCCGTC GATCCAGCAA ATCGTGGTCT GGCCTTATGC GTATGATGCA
GCGGACTTGC CCGCATGCAT GACGTCTTAT GATGCCTTCA AACTACAGGA CGCGCCGGAA
CTGGACTGTC GTCCCATGGC ATTTGGCGAT CCGCTTTATG TGATGTTTTC CTCGGGCACC
ACGGGCAAGC CCAAGTGCAT CGAGCATTGC GGCGGCGGAA CACTATTGCG GATGTTGGTG
GAGCATAAGC TTCACTGCGA TCTGAAGCCG AGCGACCGGA TGTTCTATGA CACCACATGC
AACTGGATGA TGTGGAACTG GCAGGTAGCA GCACTGGCCT CCGAGGCGGC GATTGTCCTG
TTTGACGGCA ACCCGATGTA CCCAAACCGC GAGAGGCTGT TCGACATCGC TGAGGCCGAA
GACGTCACCC ATCTGGGCGT TTCGGCAAAA TACATCGACA CCTCGTTGAA GCGCCAACAC
AAGCCTGCCC AAAGCTACAC TCTGGATTGT CTGCGAGTGG TACTGTCAAC GGGCTCACCG
CTCTCGCCGA AGGGCTTTGC CCATGTCTAC ACAGACTGGA AGGCGGATGT GCAGCTGGCG
TCAATTTGTG GCGGCACCGA TATTCTGGGC TGTTTCATTG GCGGCTGCCC GCTGCTGCCG
GTGCATCAGG GTGAGATTCA GGCACCAATG CTGGGGTTGG ACGTGGCAAC CCTGAACAGG
CAGGGCGAAC CGGTTGAGGG CGAGGCAGGT GAACTTGTTT GCCGCAATGC CCATCCGTCG
ATGCCGACCC GGTTCCTGAA CGACCCCGGC AATGCCCGCT ACCGCGCCAG ATACTTTGAG
ACGTTTCCCA ATGTCTGGCG GCAGGGCGAT TTCACGATCC GCACGAAACA AGGCGGCTAT
GTCGTGCTGG GTCGATCAGA TGCGACCCTA AACCCCGGCG GCGTGCGGAT CGGCACCGCC
GAAATCTATC GGCAGCTCGA CAAGATCGAC GCAATCGCGG ATGCGGTGGT CGTCGGCCAG
AGCGTCGACA ATGACGTGCG AGTAATCCTC TTTGTGGTGC TTGCCGAAGG TGTTGCGCTC
GACGACGGGC TCAGCGCCCG GATCAAAACG GCAATCCGCA AGAATGCCTC GCCGCGCCAT
GTGCCCGCGA AGATCCTTTT CGTCGCTGAC ATCCCACGCA CCAAGTCCGG CAAGACCGCA
GAGCTGGCGG TGCGCGATGT GGTGAACAAA CACCCTGTGC GCAACCTCTC CGGCCTCGCC
AACCCTCAAG CGCTGGCGCT GTTTACCGAC CACCCCGAAT TGCAAGCTTA A
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| Protein sequence | MRYAVCKSSR LAQSEPLAGT RSLDPDAPMT TAPPLWQPDL SACRKPLLSD FLTLAAKTSD
TTIRSFADLH AWSATEPQKF WPLAWDFCRL VGEAGPVPLL PHQDPMQVRF FPEARLNIVE
TFPKNADTRE AIVFIGEDGR RTVWSRADLK REVEMLAAAL RDAGIEAGDH VAGIVPNMPQ
AVAAMLATAS LGAIWSSCAP EGGPDVVVDR LGQIAPKLLF AADGYFYGGK RFETRAAIAE
IADRLPSIQQ IVVWPYAYDA ADLPACMTSY DAFKLQDAPE LDCRPMAFGD PLYVMFSSGT
TGKPKCIEHC GGGTLLRMLV EHKLHCDLKP SDRMFYDTTC NWMMWNWQVA ALASEAAIVL
FDGNPMYPNR ERLFDIAEAE DVTHLGVSAK YIDTSLKRQH KPAQSYTLDC LRVVLSTGSP
LSPKGFAHVY TDWKADVQLA SICGGTDILG CFIGGCPLLP VHQGEIQAPM LGLDVATLNR
QGEPVEGEAG ELVCRNAHPS MPTRFLNDPG NARYRARYFE TFPNVWRQGD FTIRTKQGGY
VVLGRSDATL NPGGVRIGTA EIYRQLDKID AIADAVVVGQ SVDNDVRVIL FVVLAEGVAL
DDGLSARIKT AIRKNASPRH VPAKILFVAD IPRTKSGKTA ELAVRDVVNK HPVRNLSGLA
NPQALALFTD HPELQA
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