| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3284 |
|---|
| Symbol | |
|---|
| ID | 4075688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 285111 |
|---|
| End bp | 285689 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638004793 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_611520 |
|---|
| Protein GI | 99078262 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.951999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGA TAGCTATCGT CTACCACAGC GGCTATGGCC ACACGGCAGT ACAGGCCAAA
GCGGTATACC GAGGCGCCAA TGAGGTTGCC GGCGCAGAGG TCTCTCTGAT CCCGGTCGAA
GACTATGCGC AAAACTGGGA GATTATTGAC GCCGCCGATG CGATCGTCTT TGGCTCCCCC
ACGTATTTTG GCAGCGCGTC TGCCCAGTTC AAATCGTTTC TGGATGAGAC ATCTGGCCGC
TGGCTCGAAG GGCGCTGGGT CAACAAGCTG GCAGCGGGGT TCACAAATTC GGCGGGGATG
AGCGGCGACA AGCTGGCAAC GCTCCAGCAG ATCAACCATT TTGCCATGCA ACATGGCATG
ATCTGGGTCG GACTTGGCTT GCCGCCTGGA AACAACACCA GCACGGGCTC GCCCGAGGAT
CTCAATCGTC TTGGTGGGTT CATGGGCGCG ATGTCGCAAG CGGATGCGGA TGTCGGACCC
GAAGTGGCGC CTGCGGGTTC GGACCTGAGG ACCGCAGAAT ACCTGGGCCG CCGGGTCGCC
GAAACCGCGC TTCGCTGGCA GGCAGGCGCT GCGACCTGA
|
|---|
| Protein sequence | MVKIAIVYHS GYGHTAVQAK AVYRGANEVA GAEVSLIPVE DYAQNWEIID AADAIVFGSP
TYFGSASAQF KSFLDETSGR WLEGRWVNKL AAGFTNSAGM SGDKLATLQQ INHFAMQHGM
IWVGLGLPPG NNTSTGSPED LNRLGGFMGA MSQADADVGP EVAPAGSDLR TAEYLGRRVA
ETALRWQAGA AT
|
|---|
| |