Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3272 |
Symbol | |
ID | 4075414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 274399 |
End bp | 275559 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638004781 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_611508 |
Protein GI | 99078250 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAA GAATAGTTGG CTGGGGGCAC ACAAAATTCG GGGTGCATAG CGGCACCTCG CTCGAGGCGT TGATCCAACA GGCGGCCGCC GAGGCGATCG CAACTGCCGG TGTTGCGGCT GAGGACGTCG ATGCGATCTG GGTTGGTCAT TTCAACAACG GCATGGTGCC GGATGCATTT GCAAGTTCGC TCGCTCTGGG GCTGGATGAT GCGTTGCGCT TCACGCCCGC AACACGGGTG GAGAACGCCT GTGCGTCGGG TTCGGCTGCG GTCTATGCAG CGCGCAGCGC CATTCGGGCC GGTGAAGCGC GCTGTGTTCT GGTACTGGGC GTCGAGAAGA TGACCGAACT GGACACCAAA GGCGTGACCG CGGCGCTGGC CGGGGCCTCC TACGCCGCAG AGGAAGCGGG CGTGAGCTTT CCACAGATAT TTGGGCGCAT CGCAGATCGG TATTTTGACG CCTTTGGCGA CCAGTCCGAG ACCCTTGCGC AGATTGCGGT CAAGAACCAC CAGAATGCGT TGAACAACCC GCTGGCGCAT ATGCAGCGCG ATGTCAGTTT CGATTTCTGC AACACGGTCA GCGACAAGAA CCCGATGATC GCAGCGCCGC TCAGGCTGAC GGATTGCTCG CTGATCACCG ATGGAGCGGC GGCGCTGGTG ATGGTTACTG ATGACATGGC GCGGGACTTC GATCACTCGG TGGGGTTTCG GGCAGCGGTG CAGATGAACG ATTTTCTGCC CATGTCCCGT CGCGACATGA CAGAGCTGAC CGCGGCCAGA CGCACCTTCG ATGCAGCCTA CACCCAAGCC GGGATCACGG TCGACGATCT TGATCTTGCC GAGGTGCATG ATTGCTTCAC GATCGCCGAG TTGATGATCT ACGAGGCGAT GGGACTGGCC GAGCGAGGCC GTGGCGCGGA TCTTGTCGCG AGCGGTGCGA CGCTGCGGGG CGGGCGGCTG CCGGTCAACC TGTCGGGCGG ATTGAAGGCC AAGGGGCATC CCGTCGGGGC CACCGGCGTA TCGATGCATG TTCTGGCCGC GCAGCAGGTC TTGGGGCGGG CCGGAGACCT GCAGGTGGAC GGCGCCGAAC TGGCCTGTGT CTTCAACATG GGAGGCTCCG GCGTCGCCAA TTACTGCTCG ATCCTGGAAG CCAAGACATG A
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Protein sequence | MDARIVGWGH TKFGVHSGTS LEALIQQAAA EAIATAGVAA EDVDAIWVGH FNNGMVPDAF ASSLALGLDD ALRFTPATRV ENACASGSAA VYAARSAIRA GEARCVLVLG VEKMTELDTK GVTAALAGAS YAAEEAGVSF PQIFGRIADR YFDAFGDQSE TLAQIAVKNH QNALNNPLAH MQRDVSFDFC NTVSDKNPMI AAPLRLTDCS LITDGAAALV MVTDDMARDF DHSVGFRAAV QMNDFLPMSR RDMTELTAAR RTFDAAYTQA GITVDDLDLA EVHDCFTIAE LMIYEAMGLA ERGRGADLVA SGATLRGGRL PVNLSGGLKA KGHPVGATGV SMHVLAAQQV LGRAGDLQVD GAELACVFNM GGSGVANYCS ILEAKT
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