Gene TM1040_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3272 
Symbol 
ID4075414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp274399 
End bp275559 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID638004781 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_611508 
Protein GI99078250 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA GAATAGTTGG CTGGGGGCAC ACAAAATTCG GGGTGCATAG CGGCACCTCG 
CTCGAGGCGT TGATCCAACA GGCGGCCGCC GAGGCGATCG CAACTGCCGG TGTTGCGGCT
GAGGACGTCG ATGCGATCTG GGTTGGTCAT TTCAACAACG GCATGGTGCC GGATGCATTT
GCAAGTTCGC TCGCTCTGGG GCTGGATGAT GCGTTGCGCT TCACGCCCGC AACACGGGTG
GAGAACGCCT GTGCGTCGGG TTCGGCTGCG GTCTATGCAG CGCGCAGCGC CATTCGGGCC
GGTGAAGCGC GCTGTGTTCT GGTACTGGGC GTCGAGAAGA TGACCGAACT GGACACCAAA
GGCGTGACCG CGGCGCTGGC CGGGGCCTCC TACGCCGCAG AGGAAGCGGG CGTGAGCTTT
CCACAGATAT TTGGGCGCAT CGCAGATCGG TATTTTGACG CCTTTGGCGA CCAGTCCGAG
ACCCTTGCGC AGATTGCGGT CAAGAACCAC CAGAATGCGT TGAACAACCC GCTGGCGCAT
ATGCAGCGCG ATGTCAGTTT CGATTTCTGC AACACGGTCA GCGACAAGAA CCCGATGATC
GCAGCGCCGC TCAGGCTGAC GGATTGCTCG CTGATCACCG ATGGAGCGGC GGCGCTGGTG
ATGGTTACTG ATGACATGGC GCGGGACTTC GATCACTCGG TGGGGTTTCG GGCAGCGGTG
CAGATGAACG ATTTTCTGCC CATGTCCCGT CGCGACATGA CAGAGCTGAC CGCGGCCAGA
CGCACCTTCG ATGCAGCCTA CACCCAAGCC GGGATCACGG TCGACGATCT TGATCTTGCC
GAGGTGCATG ATTGCTTCAC GATCGCCGAG TTGATGATCT ACGAGGCGAT GGGACTGGCC
GAGCGAGGCC GTGGCGCGGA TCTTGTCGCG AGCGGTGCGA CGCTGCGGGG CGGGCGGCTG
CCGGTCAACC TGTCGGGCGG ATTGAAGGCC AAGGGGCATC CCGTCGGGGC CACCGGCGTA
TCGATGCATG TTCTGGCCGC GCAGCAGGTC TTGGGGCGGG CCGGAGACCT GCAGGTGGAC
GGCGCCGAAC TGGCCTGTGT CTTCAACATG GGAGGCTCCG GCGTCGCCAA TTACTGCTCG
ATCCTGGAAG CCAAGACATG A
 
Protein sequence
MDARIVGWGH TKFGVHSGTS LEALIQQAAA EAIATAGVAA EDVDAIWVGH FNNGMVPDAF 
ASSLALGLDD ALRFTPATRV ENACASGSAA VYAARSAIRA GEARCVLVLG VEKMTELDTK
GVTAALAGAS YAAEEAGVSF PQIFGRIADR YFDAFGDQSE TLAQIAVKNH QNALNNPLAH
MQRDVSFDFC NTVSDKNPMI AAPLRLTDCS LITDGAAALV MVTDDMARDF DHSVGFRAAV
QMNDFLPMSR RDMTELTAAR RTFDAAYTQA GITVDDLDLA EVHDCFTIAE LMIYEAMGLA
ERGRGADLVA SGATLRGGRL PVNLSGGLKA KGHPVGATGV SMHVLAAQQV LGRAGDLQVD
GAELACVFNM GGSGVANYCS ILEAKT