| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3267 |
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| Symbol | |
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| ID | 4075409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 269124 |
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| End bp | 270077 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004776 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_611503 |
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| Protein GI | 99078245 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.322146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.753894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA TCAAACAACG CTTCTCCGGG TTCGACTTCC AGCAGACGGT GGTCTATTTC
GGCTTCGTCG CGATTTTCCT GTTCTTTGCC ATCACGCTCC ATGACGACGG GTTCCTGACC
CAGCGCAATC TGACCAATAT CGTGCTGCAG ACCGCCCCTG CGACGATCAT GGCGATTGGT
CTTGTCTTTG CGCTGAGCGC GGGGGAAATC GACCTTAGCT TTGGTTCCAT CGTCGCGGTG
TCGGCTCTGA CCGTTGCGGT GGTGTTGCGC GAGCATCCTA TGATTGTCGG CGTTGCCGCT
GGTCTTGGCG TCGGCATTTT GATCGGGGCG CTCAATGGTG CTCTGGTGGC CTATCTCAAG
CTGCCCTCTT TCCTCGTGAC GCTGGCGACC ATGGGGCTCT TTGCCGGGAT CGCGCGGTCC
ATGACCGATC TGCGATCGGT TCCGGTGATG AACGACAGCT TCACCGGCCT CTTTGGCTCG
GGCAAGCTGT TCTCGGTCCC ATCGCTCCTG ATCTGGACCG TCATTGCCGT GGGGCTTGGG
CATATCGTTT ACCGCCACAC ACGGTTCGGC GCGCATGTGC TGGCTACCGG TGACAATCCC
CGCGCGGCGC AGGTCACAGG GATCAAGGTG CCCCGCGTGC GGCTCTATGT GATGATGATC
TGTGGTGGCA CCGCAGGGCT GGCGGGGCTG CTTTATGCAG GGCGTCTGCA GGCGGCCAAA
TACACCCTCG GTGAAAGCGA TCTGATGACC GTGATCGCCG CCGTGATCGT CGGGGGGACC
GCATTGAAGG GCGGCAAAGG CTCCGTGATC GGTGCCCTCT TGGGCTCGCT CCTGATGGGG
ATGCTCAACA ATGGCCTTAT TCTGATGAAC CTCAAGGTGT CGGACCAGAT GATCGTCCGT
GGCCTGATTA TCCTGTTGGC CGTTGCCATC TCACTGCGCG ACACCAGCCG CTAA
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| Protein sequence | MTAIKQRFSG FDFQQTVVYF GFVAIFLFFA ITLHDDGFLT QRNLTNIVLQ TAPATIMAIG
LVFALSAGEI DLSFGSIVAV SALTVAVVLR EHPMIVGVAA GLGVGILIGA LNGALVAYLK
LPSFLVTLAT MGLFAGIARS MTDLRSVPVM NDSFTGLFGS GKLFSVPSLL IWTVIAVGLG
HIVYRHTRFG AHVLATGDNP RAAQVTGIKV PRVRLYVMMI CGGTAGLAGL LYAGRLQAAK
YTLGESDLMT VIAAVIVGGT ALKGGKGSVI GALLGSLLMG MLNNGLILMN LKVSDQMIVR
GLIILLAVAI SLRDTSR
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