| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3260 |
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| Symbol | |
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| ID | 4075402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 260876 |
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| End bp | 261793 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004769 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611496 |
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| Protein GI | 99078238 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.444883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA GGCAGCTAAA GTACTTTCTC GCCACGGCCG AACTGGGACA GGTCAGTCGG
GCCGCATCGG AGTTGTCGAT TTCCCAATCT TCCGTCACCA CGGCGATCCG AGAACTCGAG
CAGAGCATGG GGACGACGCT GTTCAACCGT ACCGCGCATG GGATGGATCT GACGCCCACC
GGACGCGACC TGATGAGCGC GGCGCGGGAT GTGATGGAAA AGGTCCAGAT CGCGCAGGAC
ATCGGCCAGA ACCATTCCGA TGTGACCGGC ACCATCAATA TTGCCGCGAC CTATACGGTC
TGTGGCTACT TCCTGCCCTA TCATCTCGAC CGGCTGAGCC ACCGGTTTCC AAACCTGACA
ATCAACATCT CCGAGCTGAA CCGCGAGAGC ATCGAAGAGG GGCTGATCTC CAATCGCTTT
GACGTGGCGG TGATCCTGAC CTCGAACACC TCAAACCCCG AGTTGGCGAC GCAGACCCTG
ATGCGCTCTC ATCGCCGTCT TTGGGTGCCG CAAAATCACC CGCTGGCCGG GCGCGAATTT
GCCAGCTTCG AAGACGTCGC CGCGCAGGAT TACATCATGC TCACTGTCGA TGAGGCGGCC
AACACCTCGA TGAAATACTG GGGACCGACG GGTCTGATGC CGCGGGTCAG GATGCGCACG
TCCTCGACCG AGGCGGTGCG ATCCATGGTG GCCAACGGGC TTGGGGTCAC GATCCTGTCG
GATATGGTCT ATCGCCCCTG GTCGCTGGAG GGGCGGCGGA TCTCAACCGT GGTGATGGAC
CGGGAGATCC CCTCGATGGA CGTGGGGCTG GCGTGGCGGC GCAATCAGGA GATGCCCAAT
GCGGCACGCC ATTTTGTCGA TTATTTCCGC AACGCCTATC TCTCACCGCA AATGGCGCAT
ACTGCCTGGC GCGGTTAA
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| Protein sequence | MNLRQLKYFL ATAELGQVSR AASELSISQS SVTTAIRELE QSMGTTLFNR TAHGMDLTPT
GRDLMSAARD VMEKVQIAQD IGQNHSDVTG TINIAATYTV CGYFLPYHLD RLSHRFPNLT
INISELNRES IEEGLISNRF DVAVILTSNT SNPELATQTL MRSHRRLWVP QNHPLAGREF
ASFEDVAAQD YIMLTVDEAA NTSMKYWGPT GLMPRVRMRT SSTEAVRSMV ANGLGVTILS
DMVYRPWSLE GRRISTVVMD REIPSMDVGL AWRRNQEMPN AARHFVDYFR NAYLSPQMAH
TAWRG
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