| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3252 |
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| Symbol | |
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| ID | 4075394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 252601 |
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| End bp | 253611 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004761 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_611488 |
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| Protein GI | 99078230 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0683493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AAATCCTGCC ATTAAATCCC TTCGGAGTGA TCCGGAAAAT CTTTGTCCGG
GTGGGGGTGC TCCCCTTTTT CCTGCTGGCG GCGCTGGTGG TGTTTAGCCT GCTGTCGCCC
AAGTTTCTGA CCGGTCAGAA CATCGTCAAC GTTATGCGTC AGTCGGTCTA TCTGGTACTG
GTGTCCCTGG GGCAGATGCT GGTGCTGATC TCGGGCGGCT TTGATCTCTC GGTTGGGACC
GCGATTGCCC TGACCTCGGT TGTCAGTGCT ACGGCCATGG TCTGGCTTGC GGGTATCTTT
CCCGATGCGA TCTTTCTGGT GATCCTTCTG GGCGCGCTGG CGGGGCTTCT GGCGGCGGCC
TGCGTGGGGC TCTTGAACGG GATCGGGGTC GCCTATTTTG ATGTCTCACC CTTCATCATG
ACGCTTGGGG CGTCGTCGCT CGCGGGGGGC GCTGCACTGC TGCTGACCGG CGGTGTGCCC
GTGTCGGGCT TGCCCTTTGC CTTTGCTGAT GTCTTTGGCT TTGGCCGCCT CTGGGGGGTG
CCGGTGCCCG TCATTGTCGC CATGATCTGC ATAGCGGTCA TGTGGGTTTT CATGTCGCGG
ACCTCGCTCG GTACCCAGGT CTATGCGGTT GGCGGCAACA TCAAGGCGGC GCATCTTTCT
GCGATCAACA CCAAACGGAC GCTGATGATG ACCTATGTGG GTTGCGCTCT AATTGCCGCG
CTGACAGGGC TTTTGCTGAC CGCGCGCGTG GAAAGCGGCG AAGCCAACCT CGGCGGGTCG
TTGACGCTCG AATCCATCGC CGCCTGCGTG ATCGCCGGGG TTTCCCTGCG CGGCGGCATC
GGCCGGGTCG AAAACGTGGT TCTGGGCGGG TTCTTCATCG TTCTGGTGCA AAACGGAATG
AACCTCGCGC AGGTGTCTTC CTATATGCAG ATGGTCCTTC TGGGCGCGCT TTTGATCCTC
GCGGTGATCT TTGACCAGCT GCGCTATCGG ATGATCATGG GCACAAACTG A
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| Protein sequence | MTTQILPLNP FGVIRKIFVR VGVLPFFLLA ALVVFSLLSP KFLTGQNIVN VMRQSVYLVL
VSLGQMLVLI SGGFDLSVGT AIALTSVVSA TAMVWLAGIF PDAIFLVILL GALAGLLAAA
CVGLLNGIGV AYFDVSPFIM TLGASSLAGG AALLLTGGVP VSGLPFAFAD VFGFGRLWGV
PVPVIVAMIC IAVMWVFMSR TSLGTQVYAV GGNIKAAHLS AINTKRTLMM TYVGCALIAA
LTGLLLTARV ESGEANLGGS LTLESIAACV IAGVSLRGGI GRVENVVLGG FFIVLVQNGM
NLAQVSSYMQ MVLLGALLIL AVIFDQLRYR MIMGTN
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