Gene TM1040_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3246 
Symbol 
ID4075388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp249743 
End bp250009 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content56% 
IMG OID638004755 
Producttransposase IS3/IS911 
Protein accessionYP_611482 
Protein GI99078224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00639582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT CGAAGTTCAC GGACGCGCAG AAGGCGTTCA TCATCAAGCA GGCGGAGGAC 
GGCACCTCGG TGGCCGAGGT CTACCGCAAG GCCGGGATCA GCACGGCGAC ATTTTTCAAC
TGGAAGAAAA AATATGCTGG CCTGATGCCA TCCGAGATGA AACGGCTCAG GGAACTCGAG
CAGGAGAACG CGCGTCTGAA GAAGATCGTC GCGGATCTCG CGCTCGACAA GGAAATGCTG
CAGGACGTCA TTAAGCGAAA GCTTTGA
 
Protein sequence
MKASKFTDAQ KAFIIKQAED GTSVAEVYRK AGISTATFFN WKKKYAGLMP SEMKRLRELE 
QENARLKKIV ADLALDKEML QDVIKRKL