| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3235 |
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| Symbol | |
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| ID | 4075377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 236057 |
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| End bp | 236863 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004744 |
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| Product | phosphonate ABC transporter permease |
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| Protein accession | YP_611471 |
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| Protein GI | 99078213 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC GCCCCGATAA CTTGCCAGAG AGCTGGCGCA AGCCACCCTT CATCGCCAAT
GCCGCTCTGC GGTATGTGCT GTATCTCGGC GTCGCGGTCT ATATCATCTT CACCCTCGCC
ACGCTCCCGA TTGACTGGGA TCGTGTGGCT GATGGGATGA CCCGCGCTCA GCGGATCTTC
AACGGGGCAT TCCCGCCCAG TTTCGATCGC GCGGGGCTGT TGTTTGATGG CTTCATGGAA
AGCCTGAAGA TCGCCATTCT CGCCACCGTC GGTGGTATCC TGATCTCGGT CCCGCTTGCT
TTTATGGCAG CCGCAAATAT CGCGCCGAAA CCGATCTATT TGCTGGGGCG CGGGCTGATC
ATCATCGCGC GCAGTTTCCA CCCGGTGATC GTGGCGATCA TCTTTGTCAA AGCCGTAGGC
TTTGGTCCCT TTGCGGGCGC CCTGACACTG GTGGTCTATT CCGTGGGCTT CGTCGCCAAG
CTGCTGGCCG AGCGCATTGA AGAGATCGAT TTTGGGCAGG TGGAAGCCAT GCGCTCCGCC
GGGGCCGGGT TCCTAACAAC GCAGGTCTAT GCGGTGCTGC CACAGATCAT GCCACGCCTC
GTGGGGCTCG GTATATATCA GCTCGACAGC AATCTCAGAG CCTCTGCCGT GGTCGGTATC
GTTGGCGCAG GCGGCATCGG GGCAACCCTC GCCAATGCCT TTGGCCGCTA CGACTATGAT
TTTGCCCTCG CCATCACCAT GGTTATCGTC GGTGTCATCC TCATTTCTGA GGCTGTGAGC
GGCGTCATCC GAAAGCGTAT CACATGA
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| Protein sequence | MSTRPDNLPE SWRKPPFIAN AALRYVLYLG VAVYIIFTLA TLPIDWDRVA DGMTRAQRIF
NGAFPPSFDR AGLLFDGFME SLKIAILATV GGILISVPLA FMAAANIAPK PIYLLGRGLI
IIARSFHPVI VAIIFVKAVG FGPFAGALTL VVYSVGFVAK LLAERIEEID FGQVEAMRSA
GAGFLTTQVY AVLPQIMPRL VGLGIYQLDS NLRASAVVGI VGAGGIGATL ANAFGRYDYD
FALAITMVIV GVILISEAVS GVIRKRIT
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