| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3217 |
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| Symbol | |
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| ID | 4075321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 212764 |
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| End bp | 213834 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004726 |
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| Product | ABC transporter related |
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| Protein accession | YP_611453 |
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| Protein GI | 99078195 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.257824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA CTGCACAGGG GCAGGCCATC GCACTCGAGC AGGTGCGCAA GGTTTGGGGC
GAGACTGTCT TGCTCGAAGG TCTCAGCCTT GACGTTCCTG CGGGATCATT CACTGCGGTG
CTGGGTCCGT CGGGATGTGG CAAATCCACG ACGCTTCGCA TCATAGCAGG CCTTGAGGCG
GTGACGACGG GGCAGGTTCG GATCGGGAAC CGCGATGTGA CCCAGATGAG CCCTGCGCAG
CGTGGCATTT CCATGGTGTT TCAGTCCTAT GCCTTGTTTC CCCACCTTAC CGTTGCGGAA
AACATTGTTT TTGGTCTGAA AGTTGCAGGG CTGCCGCGAC GCGAGCGTCA GCGCCGTCTG
AAGGATGTGG CCGACCTTCT CGAACTTGGC CCCTATCTCG GACGTAAACC TGCGGCGCTT
TCAGGAGGCC AGCAGCAACG GGTGGCCCTG GGGCGGGCTG TGATCTCGCA GCGCCCGGTT
TGCCTGATGG ATGAGCCTCT CTCCAATCTG GACGCCCGAT TGCGCGACGA GATGCGGCGT
GAAATCCGCC GTCTGCAGCT CGCGCTCGGT TTCACGATGG TCTATGTGAC CCACGATCAG
ACCGAGGCGA TCACCATGGC TGATCGCGTG GTCTTGATGA ACAAAGGCCA GATTGAGCAA
GTCGCCGCCC CGGAAGAGAT CTACAACCGT CCCGCGACGC CCTTTGCGGC GCGGTTTATC
GGTAACCCGC CGATGAATCT TCTGTCTCCT GCAGCCTTTG GGGCGGCGCT TGAGGCCGCG
CCCGAGAGTC TTCGGATCGG GGTGCGACCC GAAGCACTCA CGGAATCCGC CCAAGGCCCG
ATCCTCGCGG AGGTCAAAGG TGCGGAATTC CTCGGCGCGG ACACTCTGGT AGAGCTGACC
TGCGCAGGCG GCGACATTTT GGCCAAGCTG CCCGGCACAC GCGGTCTTAC CCCCGGCGAG
ACGCTGAGAT TGGCGGTTCC GCCCGAGCAG ATCCATGCCT TTGACCTGAC ACGGAACGCG
CGTCTGGAAG ATCCAGGCCT GATCGCGCGT CTGCAGGAGA TTCACTCATG A
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| Protein sequence | MTATAQGQAI ALEQVRKVWG ETVLLEGLSL DVPAGSFTAV LGPSGCGKST TLRIIAGLEA
VTTGQVRIGN RDVTQMSPAQ RGISMVFQSY ALFPHLTVAE NIVFGLKVAG LPRRERQRRL
KDVADLLELG PYLGRKPAAL SGGQQQRVAL GRAVISQRPV CLMDEPLSNL DARLRDEMRR
EIRRLQLALG FTMVYVTHDQ TEAITMADRV VLMNKGQIEQ VAAPEEIYNR PATPFAARFI
GNPPMNLLSP AAFGAALEAA PESLRIGVRP EALTESAQGP ILAEVKGAEF LGADTLVELT
CAGGDILAKL PGTRGLTPGE TLRLAVPPEQ IHAFDLTRNA RLEDPGLIAR LQEIHS
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