| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3211 |
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| Symbol | |
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| ID | 4075315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 206661 |
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| End bp | 207224 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004720 |
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| Product | CheD, stimulates methylation of MCP proteins |
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| Protein accession | YP_611447 |
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| Protein GI | 99078189 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.192174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGAACG TTTTTCAAAA TACGAGTACT GTCACCGTTC TCCAGGGTGA CTACAAGGTT
ACGACAGATC CAAAGGTGGT GTTCTCGACC GTTTTGGGCT CCTGTATTGC GGCTTGCATC
TATGATGAAC AGGTCGGTGT TGGGGGGATG AACCACTTCC TGCTGGCCTC TTCCGCAGGC
TCAGGCGGGG TGAGCGCTAG ATATGGTGTG CACGCCATGG AGCTGTTGAT CAACGGCATC
ATGAAGAAAG GAGCTCTGCG CTCCAACCTC AAGGCCAAGG TTTTTGGCGG GGCCAAAATG
TCCGCGAACC TCTCGGATAT TGGGGCGAAC AACGCAGATT TTGTGCAAAG GTTTTTGCGG
GATGAAGGCA TTCCCGTAAT CTCGTCTTCG GTTGGCGGCA CCTCGGCGAG ACGCGTGCGC
TTTCACGCCT GTTCTGGTGC TGCGCAGCAG ACACATGTGG CAGATGACAG ACGTCTGGGT
GAAGAGGAGC GCGCAGCCGT TGCACGGACG CAGGCGGCTC CTGCACGCAA ACCCGCAGCC
GCAGACAATG TGACGCTGTT CTAA
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| Protein sequence | MSNVFQNTST VTVLQGDYKV TTDPKVVFST VLGSCIAACI YDEQVGVGGM NHFLLASSAG
SGGVSARYGV HAMELLINGI MKKGALRSNL KAKVFGGAKM SANLSDIGAN NADFVQRFLR
DEGIPVISSS VGGTSARRVR FHACSGAAQQ THVADDRRLG EEERAAVART QAAPARKPAA
ADNVTLF
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