Gene TM1040_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3189 
Symbol 
ID4075293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp180535 
End bp180816 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content57% 
IMG OID638004698 
Producthypothetical protein 
Protein accessionYP_611425 
Protein GI99078167 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.63828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTACG CCTATGCAAA TATTATTGTC GCTAATGCTG ACAGCCTCGC ATCCTATCGC 
GAGAAAGCCG GAGATGCGCT CGCAAAACAT GGAGGGCGGG TGGCGCAGGC AACGCCGCAA
CAGACCATTC TGGAGGGCGC GCGGGATGAA ACCGGGCTTG GAGCGATCCT CGTGTTTGAA
ACAGTCGAAG GCGCAAAAGC CTGGATCAAC GATCCCGCGC TCTCTGACGT GCATGCGCTT
CGACGCGGCG CTGGACAAAG CACCATTACC CTGATGGCAT AA
 
Protein sequence
MVYAYANIIV ANADSLASYR EKAGDALAKH GGRVAQATPQ QTILEGARDE TGLGAILVFE 
TVEGAKAWIN DPALSDVHAL RRGAGQSTIT LMA