| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3173 |
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| Symbol | |
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| ID | 4075343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 153696 |
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| End bp | 155003 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004676 |
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| Product | ROK domain-containing protein |
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| Protein accession | YP_611409 |
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| Protein GI | 99078151 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.66636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.682387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCTT TCTCACAGGG AGAGATTGCC GCGGCGTGCC CAAGGTGGCA TAAGCGAGCG
CCTTTTGGCG GGCGGCGAGG GAGGAGCTTT GAATTGGCAC GATCAGGACG GCTGACGCCG
AGCAGCGAGC AACGCGAAAG CGGGCGCCAG CAGATACTGG ATGTGATCCG CGCGCAGGAA
AGCATCGCCC GCATCGACAT CGCCCAGGCC ACAGGCATGA GCCCGGCGAC GGTGACCGCG
ATCACCGCCG AGTTGCTGGC AGCGGGCCTG ATCGAAGAGA TCGCGCCCGA GCTGGCGCCC
GGTGCGCGCC GGGGGCGTCC GCGTGTGGCT CTGCGTCTGC GCGGCGCGGC GCGCCTGATC
GCCGGTCTCA AGGTTTCCCA TCATGTGATC TCCACCGTGA TTACCGATTT TGTCGGACAG
GAACTTGCCA GCCACGAGAT GCCGCTGGTG CAGGGCACGA TGCCGGTGCC CGAACTGTGC
GCGCAGATCC GCCGCGCGCT TGACCTCACC TGCGAGAAAG GCGGCTTCAG CATCGAGGAT
CTCTCCGGTG TCGGTCTCGG AATGGCCGGG ATGATGGATG CGGACCGGGG CTTTATCTAT
TGGTCCTCAT CGCTCGAAGA GCGCAATGTC GCCTTCACCG CCGCCATCAG TGCCGAGCTG
CCCTGTCCGG TGTTTCTGGA CAATGACGCA AACCTCGTGG CCAAGGCCGA ACATCTTTTT
GGCGAGGGGC GCACCTGCGA CAATTTCATT GTCATCACCA TCGAACACGG CGTTGGCATG
GGGATCGTGA TCGACCAGCA GATCTATCGC GGCACCCGCG GCTGCGGCGC CGAATTGGGT
CACACGAAGG TCCATCTCGA AGGGGCGCTG TGCCAATGCG GGCAACGCGG CTGTCTGGAG
GCCTATGTGG GCGATTACGC GCTCCTGCGC GAGGCGAATA TTTCGAGCGG CAGTGAACGC
CACACCACCA TCGCCTCACT GTTTCAGTCG GCTGAAAATG GCGATGTGGT GGCTAAGTCC
ATCCTTGACC GCGCGCGGCG GATGTTTGCG ATGGGGTTGG CAAATGTCGT CAACATTTTT
GACCCGAGCA AGATCATCCT CGCGGGGGCC CGGTTGTCAT TCGACTATCT CTATTCCGAC
AAGCTCATCG AGGAGATGCG TCAGTGGGTG GTGCAGGTGG ATGCCCCGCT GCCAGAGGTC
ATGGTCCATG ACTGGGGCGA TCTGATGTGG GCCAAGGGGG CGGCGGCCTA TGCGCTCGAA
GAGGTGACGG CGCGCACCGT GCGGGAGCTT GCAAATGCGG CGGCCTGA
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| Protein sequence | MYPFSQGEIA AACPRWHKRA PFGGRRGRSF ELARSGRLTP SSEQRESGRQ QILDVIRAQE
SIARIDIAQA TGMSPATVTA ITAELLAAGL IEEIAPELAP GARRGRPRVA LRLRGAARLI
AGLKVSHHVI STVITDFVGQ ELASHEMPLV QGTMPVPELC AQIRRALDLT CEKGGFSIED
LSGVGLGMAG MMDADRGFIY WSSSLEERNV AFTAAISAEL PCPVFLDNDA NLVAKAEHLF
GEGRTCDNFI VITIEHGVGM GIVIDQQIYR GTRGCGAELG HTKVHLEGAL CQCGQRGCLE
AYVGDYALLR EANISSGSER HTTIASLFQS AENGDVVAKS ILDRARRMFA MGLANVVNIF
DPSKIILAGA RLSFDYLYSD KLIEEMRQWV VQVDAPLPEV MVHDWGDLMW AKGAAAYALE
EVTARTVREL ANAAA
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