| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3169 |
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| Symbol | |
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| ID | 4075339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 149646 |
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| End bp | 150440 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638004672 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_611405 |
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| Protein GI | 99078147 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA TGCCCACATT CTTTATCTCT CATGGCGGTG GCCCATGGCC CTGGATGCCG
GAGTGGCGGG CGCAGTTCGC CCCGCTCGAA GCCTCTCTCA AGGCGATGCC GGATCAGCTG
CCGGAGCGCC CCAAAGCGGT GCTGATGATC TCCGGCCATT GGGAGACCGA GGGTTTTGCG
GTGATGTCCA GCCCACAGCC GCCCATGGTT TACGACTACA GCGGCTTTCC CCCCGAGACC
TATGAGATCA CTTACGCCGC ACCCGGCGCG CCGATTTTGG CGGCCCGGAC CCAGGATTTG
CTGGCGCAGG CAGGGTTGCC GACGCGGCTC GATCCCGAGA TCGGCTTTGA TCACGGCACC
TTTGCCCCGA TGGCAGTGAT CTACCCGGAG GCCGATGTGC CGCTTTATCA GGTCTCGCTG
CAAAAAGCCT ATGACCCGGC GGCGCATTTT GCCATGGGGC GCGCCTTGGC GCCGCTGCGC
GACGAGGGCG TTGTCATCAT CGGCTCTGGG CTCAGCTACC ACAATCTGCG CGCCTTTGGC
CCCGGTGCGC GGGTGCCGTC AGAAGCGTTT GATGCCTGGC TGAACGATGC GCTGGCATTG
GATCCGTCCG CCCGCACCGA GGCGCTGATG AACTGGGAGC AGGCCCCCTA TGCGCGCGAC
TGCCACGCCC AAGAAGACCA CCTCGCCCCG ATCTTTGCCG CTCTTGGTGC GGCAGAGCAG
GACGAAACGA CCCGGATCTA TCACCAGACC GAGATATTCG GCGGTGTGAC CGCCTCGGGC
TTTCGGTTCG GCTGA
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| Protein sequence | MTRMPTFFIS HGGGPWPWMP EWRAQFAPLE ASLKAMPDQL PERPKAVLMI SGHWETEGFA
VMSSPQPPMV YDYSGFPPET YEITYAAPGA PILAARTQDL LAQAGLPTRL DPEIGFDHGT
FAPMAVIYPE ADVPLYQVSL QKAYDPAAHF AMGRALAPLR DEGVVIIGSG LSYHNLRAFG
PGARVPSEAF DAWLNDALAL DPSARTEALM NWEQAPYARD CHAQEDHLAP IFAALGAAEQ
DETTRIYHQT EIFGGVTASG FRFG
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