| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3167 |
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| Symbol | |
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| ID | 4075337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 147745 |
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| End bp | 148710 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004670 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_611403 |
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| Protein GI | 99078145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCGTCACCCC CGATGTGTTC AAACTGGCGC AAGTGTTCAC CATCTCGCGC
GGGTCGCGCA CCGAGGCCAA GGTGCTGACG GTTCGGATTG AGGATGGAGA TCATGTGGGC
TGGGGCGAAT GTGTGCCCTA TGCGCGCTAT GACGAGACAC TCGAGTCGGT GACGGCTCAG
ATCGAAGCGC TGCCCGCTAC GTTCACCCGC GCGGAACTGC AGTCGCTGCT GCCCGCTGGG
GCGGCGCGCA ACGCGGTGGA TTGTGCCCTG TGGGATCTGG AGGCCAAAAA GGCCGGCAAG
CCGGTCTGGG AATTGGCCGG TCTGGACCAG CCGGGACCCG AGATCACCGC CTATACGCTG
TCGCTGGCCT CTCCGGAGGA GATGCAGAAA CAGGCCGCAG AGAACGCCCA TCGTCCGCTG
TTGAAGATCA AGCTCGGCAC GCCAGAGGAT ATGCCCCGCC TTGAGGCGGT GCGCGCAGGC
GCGCCCGATG CGCGGATCAT CATTGACGCC AACGAGGGCT GGTCGGCCGA GGTCTACGCC
GAGCTTGCGC CGCATCTGCT GCGCCTTGGG GTGGAGCTGG TGGAGCAACC CCTGCCCGCA
GGCGAGGATG AGGCCCTGAT CGGGATGGAA CGTCCGGTGC CGGTCTGCGC CGATGAGAGC
GCGCATGACT GCGCCAGCCT GCCAAAACTC AAGGGCAAAT ATGATGTTGT GAACATCAAA
CTGGATAAGA CCGGCGGCCT GACAGAAGCG TTGAAATTGC GCGATGCAGC GCTGGCCGAG
GGCTATCAGG TGATGGTCGG CTGCATGGTC GGATCGTCGC TGGCCATGGC CCCCGCGACA
CTGGTGGCGC AGGGTGCGTT GGTGACAGAT CTTGACGGGC CGCTCCTTCT GGCCGAAGAC
CGTCCCGAAC CGCTGACTTT TGACGCCGAG GGGGTCCACC CCCCACGGCC CGCGCTCTGG
GGCTAA
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| Protein sequence | MKITVTPDVF KLAQVFTISR GSRTEAKVLT VRIEDGDHVG WGECVPYARY DETLESVTAQ
IEALPATFTR AELQSLLPAG AARNAVDCAL WDLEAKKAGK PVWELAGLDQ PGPEITAYTL
SLASPEEMQK QAAENAHRPL LKIKLGTPED MPRLEAVRAG APDARIIIDA NEGWSAEVYA
ELAPHLLRLG VELVEQPLPA GEDEALIGME RPVPVCADES AHDCASLPKL KGKYDVVNIK
LDKTGGLTEA LKLRDAALAE GYQVMVGCMV GSSLAMAPAT LVAQGALVTD LDGPLLLAED
RPEPLTFDAE GVHPPRPALW G
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