| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3161 |
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| Symbol | |
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| ID | 4075331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 142179 |
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| End bp | 143012 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638004664 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_611397 |
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| Protein GI | 99078139 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA GTTACGAGGA TCGCATCCTG CGGGTGCTCC GGTATATTCA CGACAACCCG
GCCGGGGATC TCAGCCTCGA CCGGCTGGCG GATGTGGCGG CGATGTCGCG GTTTCACTGG
CACCGGGTGT TTCGCGCCCT CACCGGCGAG ACCTGCGGCC AATCGGTGCG CCGTATCCGG
CTGCACCGCG CTGCCGTGGC GCTGGCGCAT TCCGATGCCT CGATCGAGGA GATCGCCGCC
ACCGTGGGCT ACCCCAGCCG ACATTCCTTT TCGCGTGCCT TTACTGCGGC TTATGGCGAT
GCGCCCGGAG CCTTCCGCGC CAAGGGGCTG CATTTGCCGC CGCTTGCACT TCGCGATCCA
AAGGAGCTTT CTATGCACAA TGTCACCCTG CGCGATGAAC CCGCGCGCCA CCTCGTCACC
GTCCCGCACC GCGGCCCCTA TGCCGAGATC GGGCGCGCGT TCGAGCATTT TTCAGCGCTC
GCCAACAGTC GCAACCTCTG GCCGCAGCTG GGGCCGGTGC TCGGCGTGTA CCTCGATGCG
CCGGGCGAGA TGCCCGAAGA TCAGTTGCGC AGTTATGCCG GAGCGGAATA TCGCGGCGAT
GGCACGCCGG AGGGGCTCGA ACCCTTTGCG CTGCCTGGCG GCAAGGCGGC GGTGCTCACC
TTCAAGGGCC CCTATGCGGG GCTTGCAGCG GCCTATGACA GTCTTTTTGG TGGCTGGCTG
CCGCAATCGG GCGAGACCCC GGCCGATCAG CCCTGCTATG AGATCTATCT CAACGATCCC
CGCGCCACCG CCCCCGAAGA ACTGCTCACG GAAATCGTGC TGCCCCTGCG TTGA
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| Protein sequence | MAQSYEDRIL RVLRYIHDNP AGDLSLDRLA DVAAMSRFHW HRVFRALTGE TCGQSVRRIR
LHRAAVALAH SDASIEEIAA TVGYPSRHSF SRAFTAAYGD APGAFRAKGL HLPPLALRDP
KELSMHNVTL RDEPARHLVT VPHRGPYAEI GRAFEHFSAL ANSRNLWPQL GPVLGVYLDA
PGEMPEDQLR SYAGAEYRGD GTPEGLEPFA LPGGKAAVLT FKGPYAGLAA AYDSLFGGWL
PQSGETPADQ PCYEIYLNDP RATAPEELLT EIVLPLR
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