| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3157 |
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| Symbol | |
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| ID | 4075327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 138037 |
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| End bp | 139032 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004660 |
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| Product | ABC transporter related |
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| Protein accession | YP_611393 |
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| Protein GI | 99078135 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.161419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC TGACCCTGAC CAATGTGAAC AAATCCTTCG GCAATGTGCA TGTCCTCAAG
GACATCAACA TCGAGGTCGA TGAGGGCGAG TTCGTCGTCT TTGTCGGCCC CTCGGGCTGT
GGCAAATCCA CCCTCCTGCG CACCATCGCG GGACTTGAGG ATGTGACCTC GGGCGAGGTG
TGCATCGCGG GCGAGGTGGT CAACCAGACC CCGCCCTCCA AACGCGGCAT CGCCATGGTG
TTTCAGTCTT ACGCGCTCTA TCCGCACCTC AACGTGCGCA ACAACATGTC GCTGGCGCTG
AAACAGGCCA AGGAAAGCAA GGAAACCATC GAGGAACGCG TGGCCGAAGC CAGCCGTATG
CTGAGCCTGG GCGATTACCT CGACCGCTTC CCGTCGGAAC TCTCGGGCGG TCAGCGCCAG
CGGGTTGCCA TTGGCCGCGC CATTGTGCGC CACCCCAAGC TGTTCCTCTT TGATGAGCCG
CTTTCAAACC TCGACGCGGC CCTGCGTATG AACACGCGGC TGGAGATCGC CAATCTCCAC
GAACAACTGG GCGCAACGAT GATCTACGTC ACCCACGACC AGACCGAGGC GATGACCCTT
GCGGATAAAA TCGTGGTGCT GCGCGATGGC CGTGTCGAAC AGATCGGCTC TCCGATGGAG
CTTTATAACA ACCCGGCCAA TCAGTTTGTG GCGGGCTTCC TTGGCTCTCC GGCGATGAAC
TTCCTGCCCG CTGCCCTGCT CGAAGATGGC AACCCCAACA CGCTTGGCGT ACGTCCCGAA
GATCTCCGGT TGGATGACGC CGGCCTCCTC GAGGTGACGT CAAAGCATGT TGAACACCTC
GGCGGTGACA CCAATGTCAT CGCGGATTGC CACGGCCACC AGATCACCCT GCGGCTCTTT
GGGCAGCATG CCATCCGCAC GGGCCAGGGC CTGCGCCTGA GCATCGCCGA AGGCAAATCC
TACGTCTTTG ACCCAAGCGG CGCGCGCCTC AGCTGA
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| Protein sequence | MTALTLTNVN KSFGNVHVLK DINIEVDEGE FVVFVGPSGC GKSTLLRTIA GLEDVTSGEV
CIAGEVVNQT PPSKRGIAMV FQSYALYPHL NVRNNMSLAL KQAKESKETI EERVAEASRM
LSLGDYLDRF PSELSGGQRQ RVAIGRAIVR HPKLFLFDEP LSNLDAALRM NTRLEIANLH
EQLGATMIYV THDQTEAMTL ADKIVVLRDG RVEQIGSPME LYNNPANQFV AGFLGSPAMN
FLPAALLEDG NPNTLGVRPE DLRLDDAGLL EVTSKHVEHL GGDTNVIADC HGHQITLRLF
GQHAIRTGQG LRLSIAEGKS YVFDPSGARL S
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