| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3155 |
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| Symbol | |
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| ID | 4075325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 136087 |
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| End bp | 136926 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004658 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611391 |
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| Protein GI | 99078133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.358123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCG CACGCTCCAA CCCGATCAAC ACGGCTGCAA TGCATGGCGC GCTGATCATC
TACACCTTGA TTGCGCTGTT TCCGGTCTTT GTGATCCTGA TCAACAGCTT CAAGACCCGC
AAAAAGATCT TCCGCGAACC GCTGGCCCTG CCGGATGCGG ACAGCTTCTC CCTCGTGGGC
TATCAGACGG TGATGAAACA GGGGGATTTC TTCCTCTACT TTCAGAACTC CTTCATCGTC
ACCGTCGGCT CGCTCACGCT GATCCTGCTG TTTGGGGCCA TGGCGGCCTT TGCGCTCAGC
GAATATCGCT TTCGCGGCAA TATGCTGATG GGACTGTATC TCGCGCTCGG GATCATGATC
CCGATCCGCA TCGGCACCGT GGCGATCCTT GAAATGATGG TGTCGACGGG GCTGGTGAAC
ACGCTCTGGG CGCTGATCCT CGTCTACACG GCCCAAGGCC TGCCGCTCGC GGTCTTCATC
CTGAGTGAAT TCATGCGACA GGTGAGTGAT GACCTAAAAA ACGCTGGTCG CATCGACGGG
CTCAGTGAAT TCACGATCTT TTTCAAGCTG GTCCTGCCCT TGGTGCGCCC TGCATTGGCC
ACCGTCGCGG TCTTCAACAT GATTCCGATC TGGAACGATC TGTGGTTCCC ACTGATCCTC
GCCCCCGCCG AGGAAACCAA GACGCTGACG CTCGGCAGCC AGGTGTTCAT CGGCCAGTTC
GTGACCGACT GGAACGCGGT TCTGTCGGCG CTGTCGATGG CGATCCTGCC GGTGCTGATC
CTCTATGTGA TCTTCTCCCG CCAGCTCATT CGCGGCATCA CGTCGGGGGC GGTGAAATGA
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| Protein sequence | MSSARSNPIN TAAMHGALII YTLIALFPVF VILINSFKTR KKIFREPLAL PDADSFSLVG
YQTVMKQGDF FLYFQNSFIV TVGSLTLILL FGAMAAFALS EYRFRGNMLM GLYLALGIMI
PIRIGTVAIL EMMVSTGLVN TLWALILVYT AQGLPLAVFI LSEFMRQVSD DLKNAGRIDG
LSEFTIFFKL VLPLVRPALA TVAVFNMIPI WNDLWFPLIL APAEETKTLT LGSQVFIGQF
VTDWNAVLSA LSMAILPVLI LYVIFSRQLI RGITSGAVK
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