| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3123 |
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| Symbol | |
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| ID | 4074994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 96406 |
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| End bp | 97101 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638004625 |
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| Product | hypothetical protein |
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| Protein accession | YP_611359 |
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| Protein GI | 99078101 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.797507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGATTA CTTCTAGCGC ACCAGCACTG CCCAGCCTAT ACATTTTCCT CGACGAGGGA
GGCAACTTCG ACTTTTCGCT GAGGGGGTCG AAATACTTTA CTCTGACATG TGTTAGCTTG
TTTCGCCCAT TCACGCTCCA CACAGATTTA GATACGTTCA AGTACAACCT GATCGAGCAC
CGGATCAAAC CTCGCATTGC GATGGATCAT TTTCACTGCG CCTACGACAA CCCGCATGTC
CGAAGTAAGG TGTTTGACAT GCTTTCCGCT CAGGTGCCTG CCAATTCCGT CGACGCAGTC
ATTGTCGAGA AAAGCAAGAC GGGTCCAGCC CTACGGCCTC CGGAAGAGTT CTACCCGAGG
ATGCTGGGCT ATCTTCTGCG GTACGCCGTT GATAAGGCGC CGGGGGCAAT TGGTGAGGTT
GTCGTGATCA CTGACAGTAT TCCCGTGAAG AAAAAGAAAC GAGCCATTGA AAAGGGCATC
AAGACATCCC TTCCCAAAAT GCTTCCAACG GGCACACCAT ATCGCTTGAT GCACCACCCG
TCCGCCGCGC ACTACGGGCT TCAGGTCGCG GACTACTTCA ACTGGGCGAT CTACAGAAAG
TGGGAGCATA AAGACCCATC TTCCCACTCC AAAGTCGCAC CTCAAATCCG CACAGAGTTC
GACATCTTTC GGACCGGTAC GCGCCACTAT TATTAG
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| Protein sequence | MPITSSAPAL PSLYIFLDEG GNFDFSLRGS KYFTLTCVSL FRPFTLHTDL DTFKYNLIEH
RIKPRIAMDH FHCAYDNPHV RSKVFDMLSA QVPANSVDAV IVEKSKTGPA LRPPEEFYPR
MLGYLLRYAV DKAPGAIGEV VVITDSIPVK KKKRAIEKGI KTSLPKMLPT GTPYRLMHHP
SAAHYGLQVA DYFNWAIYRK WEHKDPSSHS KVAPQIRTEF DIFRTGTRHY Y
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