Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3122 |
Symbol | |
ID | 4074993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 95143 |
End bp | 96261 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638004624 |
Product | hypothetical protein |
Protein accession | YP_611358 |
Protein GI | 99078100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.860557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACC TTGAAGCGAT CCGGAAAACG ATTTTAGCTT GGCACGAACT GCCCAACGTC AACCAGGCTT ATACGCTGCA TTACGACGAA ACGAACAACA TCAGGACTCT GTTCCTCACA CCCGATGGTC TGAATGTCTG CAGGCCAGAC TTCTTTGTGC TCGGAGGGGT GGCACACCGT GGAAGAGCAC CGCATCTCGA CTTTTCATCA TTGAGCCACG AATTCCACCT CCAGAGATCT GCTTCTGAGT TGAAATTAAA TCAGCTCGGC AACGGCGACT TCTCCGCCCT ACTCAAGTCA AAGAAGATTA CCGCATTCCT TCACTGGCTT GTTCGTAACG AACTGTTCGT CCACTTTCAG GTGCTCGATC CACTTTACTG GTCAATTGTC GATGTGATCG ATTCCATCCT TACCGAGCAG CGGGATGTCA ACCTAATGAT GGCTCATGCG ATGCTCAAAA ACGCCTTGTA CGCCGTACTG CGCACTGATC TTGACACCAC GGCCGCGCTC TTGGGACGGT TCAACTTCCC CGATGTGGGC AGAGCACGCC GATGCGAGTT CATCGCCGAG CTTGGTGCGA TGCTCGATGA ACGCCGGAGT GTTTTGCCAG CTCAGCATTA CCTGTTCCTC AGGGAAGTGC TGCGGGTCGG GGCGCGCCTT CGGCGGCTTC CCTATCTCGA GGATGAAAAG CCAAACATAC TTATCAATGG TTTCGGTGAC TTTTATCTGC ACAGGATCGC CTTGTTCCGC AACGCCACAC ACATCCTAGA CATCGAACCA CAGATCGCCA ATTTTCTGAG AGGCCTCGAC CTTCACGACG GCGGCAGTCC AGCGACACAC TTCTCGTTCG TGAATTCCAA GCAGCACGCA TGGATACAAG TGTCGGACGC CATCACAGGC CTTCTTGGCA AGTTTTTTAA ATTCGTTAGC AAGCATACAG AAGATGAGCT GGAAGAGGCT TTGACGACCT TCAATTCGCA TCAGCAAAAG AATCTGATGG CTTTGACGCA CCTATTGCGG CGATCCATCG GGGAATGTCC AGGATTCACA ATGTATGTTC TGTCTCAGGA CGATCAGGCG CGCATTGCTC GGGTCTTGAG CCGATTTGAG AGCGTCTAG
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Protein sequence | MTNLEAIRKT ILAWHELPNV NQAYTLHYDE TNNIRTLFLT PDGLNVCRPD FFVLGGVAHR GRAPHLDFSS LSHEFHLQRS ASELKLNQLG NGDFSALLKS KKITAFLHWL VRNELFVHFQ VLDPLYWSIV DVIDSILTEQ RDVNLMMAHA MLKNALYAVL RTDLDTTAAL LGRFNFPDVG RARRCEFIAE LGAMLDERRS VLPAQHYLFL REVLRVGARL RRLPYLEDEK PNILINGFGD FYLHRIALFR NATHILDIEP QIANFLRGLD LHDGGSPATH FSFVNSKQHA WIQVSDAITG LLGKFFKFVS KHTEDELEEA LTTFNSHQQK NLMALTHLLR RSIGECPGFT MYVLSQDDQA RIARVLSRFE SV
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