| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3117 |
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| Symbol | |
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| ID | 4074988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 89666 |
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| End bp | 90961 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004619 |
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| Product | poly-gamma-glutamate biosynthesis protein |
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| Protein accession | YP_611353 |
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| Protein GI | 99078095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC TGGCCCTGAC CGGTGACAGC ATCCTGCAAA GGCGGCTTCT CAGCACGTCA
GATCCGGTTA TCAAACCTCT CTTTGATCTG ATCCGTGGAT GCGATGCGGC ATTCACCAAC
CTCGAGGTCC TGCCGAACGA TTATCGCGGC GATCCCGCTT TTGACAGCGG CGGGTCGCAT
TTCGGCGCGC CGTCATGGGT GCTGGATGAT CTGGTCGAAG CCGGGTTCGG CATGTTTTCC
ACGGCGACAA ACCATACGCT CGACTACTCC ATCTCTGGGC TTGAATATGG GTTGGACCAA
CTCGACAAAC GCGGCCTGTG CCACGCCGGG GCGGGACGAC ACCTTGAGGA GGCCCGACGC
GCCGCTTACC TTACAACGCC CAATGCGGCG ATCGGCATGG TCGCTTGCGG GTCCACTTAT
ACAAAGGGGC AGGAAGCCGC GCGCCAGACG GCAGCCATGC AGGGGCGACC CGGCCTGAAC
CCGCTGTGGC CCGACAGCAC CTATGAGGTG ACGGCAGAGC AAATGGCCGT CGTGAAAGAG
ATGGCCGAGG GGCTGGGCCT GGAGAAGTTC CGCCAGATCC GCATCAGCAC GGGGTTTGCC
TTCGAGGCCC CGGAGGGCAT TTTTCCCTTC AATGGCATGA ACTTCCGCGT AGGTGAGCAA
ACCCGCCATG TGCGCCATCC GAACCCCAAA GACTTGGCCG CGATCATCCG CTGGGTCGAA
GAGGCTAAAC TGGCCTCTGA CATCGCACTG GTCAGCATCC ATGCCCATGA ACATGCCGAT
GAAAAGGACC AACCAGCGGA TTTCATCGTC GAGTTCGCCC ACGCGGTGAT CGACGCGGGT
GCCGACCTAG TCGTCGGCCA CGGGCCGCAC CTGCTGCGTG GCATGGAAAT CTACAAGGGC
AAACCGATTT TCTACAGTCT TGGCAATTTC ATCGGTCAGA ATGAAATGGT GCGGCAGCTG
CCAGGCGAAT CCTATGATCG CTTTCATGTC GATGACCGAC TGACACCGAC ACAGCTCTAT
AAGCAGCGTA CACTAGATGA CCAGAAAGGC TTCCCTTCCG ATGAACGCTA TTGGCAGACT
GTGGTCCCAA TATGCCACTT TGAAGGGGAC GGACTTGTCG ATGTCGAAAT CCATCCCGTT
TCTCTTGGCC TGGGTGAGCA GCGTCACCGC AGGGGGCGTC CACGTTTGGC ACATGGTGCC
GAGGCTGAAT CTATTCTCAA CCGGTTTTCC TCGCTGTCGT ACGAATTTGG ATCAACGCTT
GAGGTCGGTG ACACCTGCGC CAATGCCGTT CTCTGA
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| Protein sequence | MTTLALTGDS ILQRRLLSTS DPVIKPLFDL IRGCDAAFTN LEVLPNDYRG DPAFDSGGSH
FGAPSWVLDD LVEAGFGMFS TATNHTLDYS ISGLEYGLDQ LDKRGLCHAG AGRHLEEARR
AAYLTTPNAA IGMVACGSTY TKGQEAARQT AAMQGRPGLN PLWPDSTYEV TAEQMAVVKE
MAEGLGLEKF RQIRISTGFA FEAPEGIFPF NGMNFRVGEQ TRHVRHPNPK DLAAIIRWVE
EAKLASDIAL VSIHAHEHAD EKDQPADFIV EFAHAVIDAG ADLVVGHGPH LLRGMEIYKG
KPIFYSLGNF IGQNEMVRQL PGESYDRFHV DDRLTPTQLY KQRTLDDQKG FPSDERYWQT
VVPICHFEGD GLVDVEIHPV SLGLGEQRHR RGRPRLAHGA EAESILNRFS SLSYEFGSTL
EVGDTCANAV L
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